Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 AC090340.1-201ENST00000620778 4980 ntBASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HERC4Q5GLZ8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 KRT8P10-201ENST00000450021 1447 ntBASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 AC004870.1-201ENST00000315132 882 ntBASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 STARP1-201ENST00000397973 869 ntBASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 SPDYE15P-201ENST00000424157 909 ntBASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.21■□□□□ 0.83
HERC4Q5GLZ8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 ZNF444P1-201ENST00000559497 298 ntBASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 AC079602.3-201ENST00000623931 403 ntBASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms