Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 BCL2-203ENST00000589955 5011 ntBASIC15.82■□□□□ 0.12
HIST1H3AP68431 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HIST1H3AP68431 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
HIST1H3AP68431 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HIST1H3AP68431 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.82■□□□□ 0.12
HIST1H3AP68431 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.82■□□□□ 0.12
HIST1H3AP68431 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 AL136038.4-201ENST00000603606 1261 ntBASIC15.82■□□□□ 0.12
HIST1H3AP68431 LINC01023-201ENST00000606054 436 ntBASIC15.82■□□□□ 0.12
HIST1H3AP68431 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.82■□□□□ 0.12
HIST1H3AP68431 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.82■□□□□ 0.12
HIST1H3AP68431 AC006116.8-202ENST00000587620 1550 ntBASIC15.82■□□□□ 0.12
HIST1H3AP68431 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.82■□□□□ 0.12
HIST1H3AP68431 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HIST1H3AP68431 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.82■□□□□ 0.12
HIST1H3AP68431 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 AC067852.2-201ENST00000590513 2313 ntBASIC15.81■□□□□ 0.12
HIST1H3AP68431 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HIST1H3AP68431 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H3AP68431 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 RNF152P1-201ENST00000397754 604 ntBASIC15.8■□□□□ 0.12
HIST1H3AP68431 TSPY5P-201ENST00000426936 936 ntBASIC15.8■□□□□ 0.12
HIST1H3AP68431 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 AC006011.2-201ENST00000621313 1158 ntBASIC15.8■□□□□ 0.12
HIST1H3AP68431 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 AC134043.2-201ENST00000624206 2238 ntBASIC15.8■□□□□ 0.12
HIST1H3AP68431 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms