Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4XP62701 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4XP62701 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 AP000523.1-201ENST00000398242 1049 ntBASIC16.35■□□□□ 0.21
RPS4XP62701 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4XP62701 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4XP62701 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.35■□□□□ 0.21
RPS4XP62701 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.35■□□□□ 0.21
RPS4XP62701 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4XP62701 MIR3917-201ENST00000580971 93 ntBASIC16.35■□□□□ 0.21
RPS4XP62701 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 AC024243.1-201ENST00000609234 778 ntBASIC16.35■□□□□ 0.21
RPS4XP62701 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 AP000550.4-202ENST00000639755 178 ntBASIC16.35■□□□□ 0.21
RPS4XP62701 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RPS4XP62701 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RPS4XP62701 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.35■□□□□ 0.21
RPS4XP62701 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.35■□□□□ 0.21
RPS4XP62701 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4XP62701 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4XP62701 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
RPS4XP62701 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS4XP62701 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RPS4XP62701 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RPS4XP62701 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS4XP62701 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.34■□□□□ 0.21
RPS4XP62701 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.34■□□□□ 0.21
RPS4XP62701 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.34■□□□□ 0.21
RPS4XP62701 DUTP2-201ENST00000519164 463 ntBASIC16.34■□□□□ 0.21
RPS4XP62701 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS4XP62701 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.34■□□□□ 0.21
RPS4XP62701 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.34■□□□□ 0.21
RPS4XP62701 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RPS4XP62701 AL121956.5-201ENST00000625261 221 ntBASIC16.34■□□□□ 0.21
RPS4XP62701 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RPS4XP62701 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RPS4XP62701 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RPS4XP62701 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4XP62701 AC132938.6-201ENST00000623828 1655 ntBASIC16.34■□□□□ 0.21
RPS4XP62701 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPS4XP62701 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RPS4XP62701 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPS4XP62701 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPS4XP62701 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
RPS4XP62701 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPS4XP62701 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.33■□□□□ 0.2
RPS4XP62701 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.33■□□□□ 0.2
RPS4XP62701 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.33■□□□□ 0.2
RPS4XP62701 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.33■□□□□ 0.2
RPS4XP62701 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RPS4XP62701 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.33■□□□□ 0.2
RPS4XP62701 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.33■□□□□ 0.2
RPS4XP62701 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.33■□□□□ 0.2
RPS4XP62701 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RPS4XP62701 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.33■□□□□ 0.2
RPS4XP62701 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RPS4XP62701 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.33■□□□□ 0.2
RPS4XP62701 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
RPS4XP62701 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPS4XP62701 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms