Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PSMD4P55036 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PSMD4P55036 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PSMD4P55036 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PSMD4P55036 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PSMD4P55036 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.87■□□□□ 0.29
PSMD4P55036 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.87■□□□□ 0.29
PSMD4P55036 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.87■□□□□ 0.29
PSMD4P55036 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PSMD4P55036 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.87■□□□□ 0.29
PSMD4P55036 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PSMD4P55036 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.87■□□□□ 0.29
PSMD4P55036 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.86■□□□□ 0.29
PSMD4P55036 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PSMD4P55036 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PSMD4P55036 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
PSMD4P55036 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PSMD4P55036 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PSMD4P55036 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PSMD4P55036 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PSMD4P55036 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PSMD4P55036 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PSMD4P55036 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.86■□□□□ 0.29
PSMD4P55036 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.86■□□□□ 0.29
PSMD4P55036 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.86■□□□□ 0.29
PSMD4P55036 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PSMD4P55036 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PSMD4P55036 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.86■□□□□ 0.29
PSMD4P55036 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PSMD4P55036 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PSMD4P55036 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
PSMD4P55036 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PSMD4P55036 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PSMD4P55036 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.85■□□□□ 0.29
PSMD4P55036 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
PSMD4P55036 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.85■□□□□ 0.29
PSMD4P55036 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PSMD4P55036 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PSMD4P55036 CROCCP1-201ENST00000426910 5675 ntBASIC16.85■□□□□ 0.29
PSMD4P55036 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.85■□□□□ 0.29
PSMD4P55036 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.85■□□□□ 0.29
PSMD4P55036 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 AL136038.4-201ENST00000603606 1261 ntBASIC16.85■□□□□ 0.29
PSMD4P55036 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PSMD4P55036 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.85■□□□□ 0.29
PSMD4P55036 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PSMD4P55036 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PSMD4P55036 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PSMD4P55036 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.85■□□□□ 0.29
PSMD4P55036 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.84■□□□□ 0.29
PSMD4P55036 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.84■□□□□ 0.29
PSMD4P55036 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.84■□□□□ 0.29
PSMD4P55036 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.84■□□□□ 0.29
PSMD4P55036 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PSMD4P55036 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PSMD4P55036 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.84■□□□□ 0.29
PSMD4P55036 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.84■□□□□ 0.29
PSMD4P55036 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.84■□□□□ 0.29
PSMD4P55036 AC063952.2-201ENST00000498792 1227 ntBASIC16.84■□□□□ 0.29
PSMD4P55036 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.84■□□□□ 0.29
PSMD4P55036 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.84■□□□□ 0.29
PSMD4P55036 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.84■□□□□ 0.29
PSMD4P55036 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.84■□□□□ 0.29
PSMD4P55036 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PSMD4P55036 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.84■□□□□ 0.29
PSMD4P55036 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PSMD4P55036 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PSMD4P55036 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PSMD4P55036 NOC2LP1-202ENST00000452600 2235 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms