Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS2P54868 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.81■□□□□ 0.92
HMGCS2P54868 ESPNP-201ENST00000270691 2015 ntBASIC20.81■□□□□ 0.92
HMGCS2P54868 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCS2P54868 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
HMGCS2P54868 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCS2P54868 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS2P54868 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCS2P54868 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HMGCS2P54868 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGCS2P54868 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.8■□□□□ 0.92
HMGCS2P54868 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 AL591424.1-201ENST00000442569 1213 ntBASIC20.8■□□□□ 0.92
HMGCS2P54868 KRT18P3-201ENST00000451602 1288 ntBASIC20.8■□□□□ 0.92
HMGCS2P54868 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.8■□□□□ 0.92
HMGCS2P54868 UNC93B6-202ENST00000528242 690 ntBASIC20.8■□□□□ 0.92
HMGCS2P54868 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGCS2P54868 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.8■□□□□ 0.92
HMGCS2P54868 AC055717.3-201ENST00000622967 595 ntBASIC20.8■□□□□ 0.92
HMGCS2P54868 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HMGCS2P54868 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.8■□□□□ 0.92
HMGCS2P54868 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS2P54868 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS2P54868 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS2P54868 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.79■□□□□ 0.92
HMGCS2P54868 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS2P54868 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS2P54868 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS2P54868 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS2P54868 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
HMGCS2P54868 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS2P54868 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS2P54868 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.79■□□□□ 0.92
HMGCS2P54868 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.79■□□□□ 0.92
HMGCS2P54868 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.79■□□□□ 0.92
HMGCS2P54868 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS2P54868 AL691403.2-201ENST00000618460 490 ntBASIC20.79■□□□□ 0.92
HMGCS2P54868 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
HMGCS2P54868 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.79■□□□□ 0.92
HMGCS2P54868 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.79■□□□□ 0.92
HMGCS2P54868 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS2P54868 AC097374.2-201ENST00000618617 1306 ntBASIC20.78■□□□□ 0.92
HMGCS2P54868 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HMGCS2P54868 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.78■□□□□ 0.92
HMGCS2P54868 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS2P54868 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS2P54868 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGCS2P54868 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HMGCS2P54868 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS2P54868 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HMGCS2P54868 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS2P54868 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS2P54868 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS2P54868 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.78■□□□□ 0.92
HMGCS2P54868 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS2P54868 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.78■□□□□ 0.92
HMGCS2P54868 AC010327.4-202ENST00000591484 748 ntBASIC20.78■□□□□ 0.92
HMGCS2P54868 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.78■□□□□ 0.92
HMGCS2P54868 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS2P54868 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS2P54868 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HMGCS2P54868 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS2P54868 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS2P54868 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGCS2P54868 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS2P54868 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
HMGCS2P54868 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.77■□□□□ 0.92
HMGCS2P54868 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS2P54868 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
HMGCS2P54868 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS2P54868 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.77■□□□□ 0.92
HMGCS2P54868 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS2P54868 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS2P54868 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS2P54868 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS2P54868 LAGE3P1-201ENST00000425356 484 ntBASIC20.77■□□□□ 0.92
HMGCS2P54868 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.77■□□□□ 0.92
HMGCS2P54868 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
HMGCS2P54868 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS2P54868 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS2P54868 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.77■□□□□ 0.92
HMGCS2P54868 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS2P54868 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.77■□□□□ 0.92
HMGCS2P54868 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.77■□□□□ 0.92
HMGCS2P54868 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms