Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDK7P50613 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK7P50613 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDK7P50613 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK7P50613 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK7P50613 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK7P50613 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.95■□□□□ 0.78
CDK7P50613 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.95■□□□□ 0.78
CDK7P50613 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDK7P50613 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK7P50613 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 AP002414.3-201ENST00000589352 1468 ntBASIC19.94■□□□□ 0.78
CDK7P50613 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.94■□□□□ 0.78
CDK7P50613 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDK7P50613 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDK7P50613 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CDK7P50613 RPS8P6-201ENST00000426177 609 ntBASIC19.94■□□□□ 0.78
CDK7P50613 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.94■□□□□ 0.78
CDK7P50613 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CDK7P50613 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
CDK7P50613 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.94■□□□□ 0.78
CDK7P50613 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK7P50613 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK7P50613 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.94■□□□□ 0.78
CDK7P50613 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK7P50613 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
CDK7P50613 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CDK7P50613 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK7P50613 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK7P50613 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK7P50613 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK7P50613 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK7P50613 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK7P50613 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK7P50613 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK7P50613 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK7P50613 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CDK7P50613 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDK7P50613 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.93■□□□□ 0.78
CDK7P50613 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.93■□□□□ 0.78
CDK7P50613 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.93■□□□□ 0.78
CDK7P50613 AC004967.1-201ENST00000453589 447 ntBASIC19.93■□□□□ 0.78
CDK7P50613 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK7P50613 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.93■□□□□ 0.78
CDK7P50613 LINC02084-201ENST00000606069 1096 ntBASIC19.93■□□□□ 0.78
CDK7P50613 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK7P50613 AC079781.4-201ENST00000641908 219 ntBASIC19.93■□□□□ 0.78
CDK7P50613 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDK7P50613 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
CDK7P50613 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.93■□□□□ 0.78
CDK7P50613 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK7P50613 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK7P50613 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.93■□□□□ 0.78
CDK7P50613 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.93■□□□□ 0.78
CDK7P50613 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK7P50613 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDK7P50613 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK7P50613 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK7P50613 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK7P50613 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK7P50613 LINC01126-201ENST00000623515 1646 ntBASIC19.92■□□□□ 0.78
CDK7P50613 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDK7P50613 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK7P50613 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK7P50613 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK7P50613 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK7P50613 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK7P50613 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDK7P50613 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK7P50613 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK7P50613 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK7P50613 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDK7P50613 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK7P50613 AC134684.3-201ENST00000641758 218 ntBASIC19.92■□□□□ 0.78
CDK7P50613 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK7P50613 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK7P50613 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDK7P50613 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK7P50613 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK7P50613 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDK7P50613 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK7P50613 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK7P50613 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDK7P50613 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK7P50613 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK7P50613 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK7P50613 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDK7P50613 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CDK7P50613 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms