Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CENPAP49450 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CENPAP49450 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPAP49450 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
CENPAP49450 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPAP49450 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPAP49450 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CENPAP49450 UNC93B2-201ENST00000285383 730 ntBASIC16.42■□□□□ 0.22
CENPAP49450 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.42■□□□□ 0.22
CENPAP49450 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.42■□□□□ 0.22
CENPAP49450 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CENPAP49450 AC008550.1-201ENST00000511500 884 ntBASIC16.42■□□□□ 0.22
CENPAP49450 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPAP49450 MIR3180-5-201ENST00000583743 153 ntBASIC16.42■□□□□ 0.22
CENPAP49450 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
CENPAP49450 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPAP49450 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPAP49450 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 KRT8P7-201ENST00000533003 1432 ntBASIC16.42■□□□□ 0.22
CENPAP49450 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 AC036111.1-201ENST00000533973 1582 ntBASIC16.42■□□□□ 0.22
CENPAP49450 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPAP49450 REXO1L9P-201ENST00000604264 2108 ntBASIC16.42■□□□□ 0.22
CENPAP49450 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.42■□□□□ 0.22
CENPAP49450 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.42■□□□□ 0.22
CENPAP49450 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPAP49450 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPAP49450 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPAP49450 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.41■□□□□ 0.22
CENPAP49450 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPAP49450 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CENPAP49450 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CENPAP49450 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPAP49450 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPAP49450 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CENPAP49450 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPAP49450 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.41■□□□□ 0.22
CENPAP49450 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.41■□□□□ 0.22
CENPAP49450 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPAP49450 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPAP49450 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPAP49450 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CENPAP49450 GMCL1P1-201ENST00000463439 1581 ntBASIC16.41■□□□□ 0.22
CENPAP49450 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPAP49450 ESPNP-201ENST00000270691 2015 ntBASIC16.41■□□□□ 0.22
CENPAP49450 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPAP49450 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPAP49450 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPAP49450 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPAP49450 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPAP49450 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPAP49450 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPAP49450 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPAP49450 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPAP49450 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CENPAP49450 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
CENPAP49450 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 FLJ13224-201ENST00000313737 1514 ntBASIC16.4■□□□□ 0.22
CENPAP49450 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.4■□□□□ 0.22
CENPAP49450 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CENPAP49450 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.4■□□□□ 0.22
CENPAP49450 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.4■□□□□ 0.22
CENPAP49450 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.4■□□□□ 0.22
CENPAP49450 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.4■□□□□ 0.22
CENPAP49450 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.4■□□□□ 0.22
CENPAP49450 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.4■□□□□ 0.22
CENPAP49450 MIR4785-201ENST00000585005 73 ntBASIC16.4■□□□□ 0.22
CENPAP49450 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.4■□□□□ 0.22
CENPAP49450 TMEM191A-211ENST00000637163 1067 ntBASIC16.4■□□□□ 0.22
CENPAP49450 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms