Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC1P35251 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC1P35251 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RFC1P35251 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 AC104076.2-201ENST00000448912 469 ntBASIC19.09■□□□□ 0.65
RFC1P35251 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.09■□□□□ 0.65
RFC1P35251 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.09■□□□□ 0.65
RFC1P35251 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.09■□□□□ 0.65
RFC1P35251 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.09■□□□□ 0.65
RFC1P35251 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RFC1P35251 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RFC1P35251 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RFC1P35251 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 FLJ13224-201ENST00000313737 1514 ntBASIC19.09■□□□□ 0.65
RFC1P35251 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC1P35251 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC1P35251 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC1P35251 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC1P35251 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RFC1P35251 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.08■□□□□ 0.65
RFC1P35251 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC1P35251 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC1P35251 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC1P35251 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC1P35251 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC1P35251 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC1P35251 STARP1-201ENST00000397973 869 ntBASIC19.08■□□□□ 0.64
RFC1P35251 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.08■□□□□ 0.64
RFC1P35251 TSPY5P-201ENST00000426936 936 ntBASIC19.08■□□□□ 0.64
RFC1P35251 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC1P35251 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.08■□□□□ 0.64
RFC1P35251 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RFC1P35251 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC1P35251 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.08■□□□□ 0.64
RFC1P35251 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFC1P35251 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFC1P35251 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC1P35251 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFC1P35251 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.08■□□□□ 0.64
RFC1P35251 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC1P35251 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 AC067852.2-201ENST00000590513 2313 ntBASIC19.07■□□□□ 0.64
RFC1P35251 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RFC1P35251 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.07■□□□□ 0.64
RFC1P35251 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RFC1P35251 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.07■□□□□ 0.64
RFC1P35251 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RFC1P35251 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
RFC1P35251 RNF152P1-201ENST00000397754 604 ntBASIC19.07■□□□□ 0.64
RFC1P35251 RCN1P1-201ENST00000400413 996 ntBASIC19.07■□□□□ 0.64
RFC1P35251 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.07■□□□□ 0.64
RFC1P35251 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.07■□□□□ 0.64
RFC1P35251 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
RFC1P35251 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 AL391807.1-203ENST00000604392 2365 ntBASIC19.07■□□□□ 0.64
RFC1P35251 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.07■□□□□ 0.64
RFC1P35251 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.07■□□□□ 0.64
RFC1P35251 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
RFC1P35251 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC1P35251 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RFC1P35251 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RFC1P35251 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.06■□□□□ 0.64
RFC1P35251 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
RFC1P35251 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RFC1P35251 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RFC1P35251 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RFC1P35251 AC132938.6-201ENST00000623828 1655 ntBASIC19.06■□□□□ 0.64
RFC1P35251 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 AK4P3-201ENST00000418260 669 ntBASIC19.06■□□□□ 0.64
RFC1P35251 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.06■□□□□ 0.64
RFC1P35251 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms