Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN4P29074 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.19■□□□□ 0.5
PTPN4P29074 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN4P29074 BX664615.1-201ENST00000443558 458 ntBASIC18.19■□□□□ 0.5
PTPN4P29074 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.19■□□□□ 0.5
PTPN4P29074 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.19■□□□□ 0.5
PTPN4P29074 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
PTPN4P29074 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN4P29074 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN4P29074 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN4P29074 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN4P29074 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN4P29074 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTPN4P29074 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN4P29074 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN4P29074 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN4P29074 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.18■□□□□ 0.5
PTPN4P29074 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 AL499627.1-201ENST00000569373 2188 ntBASIC18.18■□□□□ 0.5
PTPN4P29074 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PTPN4P29074 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.18■□□□□ 0.5
PTPN4P29074 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.18■□□□□ 0.5
PTPN4P29074 AL160286.2-201ENST00000567150 934 ntBASIC18.18■□□□□ 0.5
PTPN4P29074 AC087388.1-201ENST00000571370 1112 ntBASIC18.18■□□□□ 0.5
PTPN4P29074 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.18■□□□□ 0.5
PTPN4P29074 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PTPN4P29074 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN4P29074 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN4P29074 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN4P29074 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN4P29074 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN4P29074 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN4P29074 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPN4P29074 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN4P29074 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN4P29074 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN4P29074 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PTPN4P29074 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PTPN4P29074 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.17■□□□□ 0.5
PTPN4P29074 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PTPN4P29074 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN4P29074 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PTPN4P29074 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPN4P29074 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PTPN4P29074 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PTPN4P29074 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN4P29074 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN4P29074 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN4P29074 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN4P29074 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN4P29074 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN4P29074 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PTPN4P29074 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN4P29074 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PTPN4P29074 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN4P29074 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN4P29074 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN4P29074 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 AK4P3-201ENST00000418260 669 ntBASIC18.16■□□□□ 0.5
PTPN4P29074 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 WWOX-216ENST00000569818 525 ntBASIC18.16■□□□□ 0.5
PTPN4P29074 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PTPN4P29074 AC010653.2-201ENST00000623505 997 ntBASIC18.16■□□□□ 0.5
PTPN4P29074 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
PTPN4P29074 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN4P29074 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN4P29074 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN4P29074 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms