Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.39■□□□□ 0.21
GDF1P27539 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.39■□□□□ 0.21
GDF1P27539 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.39■□□□□ 0.21
GDF1P27539 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.39■□□□□ 0.21
GDF1P27539 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 PKD1P1-201ENST00000458669 6805 ntBASIC16.39■□□□□ 0.21
GDF1P27539 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.39■□□□□ 0.21
GDF1P27539 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
GDF1P27539 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GDF1P27539 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
GDF1P27539 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.38■□□□□ 0.21
GDF1P27539 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GDF1P27539 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
GDF1P27539 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 AC004408.2-201ENST00000623613 2777 ntBASIC16.38■□□□□ 0.21
GDF1P27539 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
GDF1P27539 OR6D1P-202ENST00000641007 5290 ntBASIC16.38■□□□□ 0.21
GDF1P27539 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
GDF1P27539 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.38■□□□□ 0.21
GDF1P27539 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.38■□□□□ 0.21
GDF1P27539 AC111152.3-201ENST00000569699 673 ntBASIC16.38■□□□□ 0.21
GDF1P27539 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.38■□□□□ 0.21
GDF1P27539 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.38■□□□□ 0.21
GDF1P27539 AL121772.3-201ENST00000610840 674 ntBASIC16.38■□□□□ 0.21
GDF1P27539 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
GDF1P27539 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDF1P27539 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
GDF1P27539 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.37■□□□□ 0.21
GDF1P27539 NSUN5P1-202ENST00000421140 1535 ntBASIC16.37■□□□□ 0.21
GDF1P27539 NSUN5P2-203ENST00000457352 1529 ntBASIC16.37■□□□□ 0.21
GDF1P27539 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
GDF1P27539 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.37■□□□□ 0.21
GDF1P27539 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
GDF1P27539 KRT18P65-201ENST00000439811 1286 ntBASIC16.37■□□□□ 0.21
GDF1P27539 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.37■□□□□ 0.21
GDF1P27539 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
GDF1P27539 AC091607.1-201ENST00000490318 1060 ntBASIC16.37■□□□□ 0.21
GDF1P27539 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.37■□□□□ 0.21
GDF1P27539 LINC01711-201ENST00000598340 967 ntBASIC16.37■□□□□ 0.21
GDF1P27539 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.37■□□□□ 0.21
GDF1P27539 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
GDF1P27539 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.37■□□□□ 0.21
GDF1P27539 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
GDF1P27539 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDF1P27539 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.37■□□□□ 0.21
GDF1P27539 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.37■□□□□ 0.21
GDF1P27539 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.36■□□□□ 0.21
GDF1P27539 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
GDF1P27539 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.36■□□□□ 0.21
GDF1P27539 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
GDF1P27539 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms