Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.58■□□□□ 0.08
CD40P25942 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.58■□□□□ 0.08
CD40P25942 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.58■□□□□ 0.08
CD40P25942 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.58■□□□□ 0.08
CD40P25942 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CD40P25942 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CD40P25942 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD40P25942 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CD40P25942 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CD40P25942 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.57■□□□□ 0.08
CD40P25942 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.57■□□□□ 0.08
CD40P25942 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CD40P25942 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.57■□□□□ 0.08
CD40P25942 TNXA-203ENST00000507684 2038 ntBASIC15.57■□□□□ 0.08
CD40P25942 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.57■□□□□ 0.08
CD40P25942 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CD40P25942 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.57■□□□□ 0.08
CD40P25942 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 EMBP1-201ENST00000458200 901 ntBASIC15.57■□□□□ 0.08
CD40P25942 AC096582.2-201ENST00000510860 516 ntBASIC15.57■□□□□ 0.08
CD40P25942 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.57■□□□□ 0.08
CD40P25942 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.57■□□□□ 0.08
CD40P25942 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.57■□□□□ 0.08
CD40P25942 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.57■□□□□ 0.08
CD40P25942 AC005336.2-201ENST00000593183 939 ntBASIC15.57■□□□□ 0.08
CD40P25942 BNIP3P18-201ENST00000593976 575 ntBASIC15.57■□□□□ 0.08
CD40P25942 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CD40P25942 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.57■□□□□ 0.08
CD40P25942 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.57■□□□□ 0.08
CD40P25942 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 AC093503.3-201ENST00000624917 2352 ntBASIC15.57■□□□□ 0.08
CD40P25942 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.57■□□□□ 0.08
CD40P25942 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CD40P25942 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD40P25942 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.56■□□□□ 0.08
CD40P25942 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD40P25942 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD40P25942 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD40P25942 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD40P25942 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CD40P25942 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD40P25942 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD40P25942 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD40P25942 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD40P25942 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CD40P25942 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.56■□□□□ 0.08
CD40P25942 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.56■□□□□ 0.08
CD40P25942 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.56■□□□□ 0.08
CD40P25942 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.56■□□□□ 0.08
CD40P25942 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.56■□□□□ 0.08
CD40P25942 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CD40P25942 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD40P25942 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.56■□□□□ 0.08
CD40P25942 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CD40P25942 PHGDH-209ENST00000641074 1780 ntBASIC15.56■□□□□ 0.08
CD40P25942 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD40P25942 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD40P25942 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD40P25942 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CD40P25942 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.56■□□□□ 0.08
CD40P25942 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CD40P25942 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.55■□□□□ 0.08
CD40P25942 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CD40P25942 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD40P25942 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms