Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHMP24386 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.93■□□□□ 0.3
CHMP24386 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.93■□□□□ 0.3
CHMP24386 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 RCC2P3-201ENST00000418112 1537 ntBASIC16.93■□□□□ 0.3
CHMP24386 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
CHMP24386 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.93■□□□□ 0.3
CHMP24386 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.93■□□□□ 0.3
CHMP24386 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.93■□□□□ 0.3
CHMP24386 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.93■□□□□ 0.3
CHMP24386 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHMP24386 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.93■□□□□ 0.3
CHMP24386 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.93■□□□□ 0.3
CHMP24386 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.93■□□□□ 0.3
CHMP24386 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP24386 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.92■□□□□ 0.3
CHMP24386 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHMP24386 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHMP24386 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.92■□□□□ 0.3
CHMP24386 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHMP24386 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.92■□□□□ 0.3
CHMP24386 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHMP24386 TSPY5P-201ENST00000426936 936 ntBASIC16.92■□□□□ 0.3
CHMP24386 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.92■□□□□ 0.3
CHMP24386 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.92■□□□□ 0.3
CHMP24386 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 AL445228.2-201ENST00000605589 952 ntBASIC16.92■□□□□ 0.3
CHMP24386 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.92■□□□□ 0.3
CHMP24386 SIRPAP1-201ENST00000448467 1770 ntBASIC16.92■□□□□ 0.3
CHMP24386 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP24386 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
CHMP24386 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP24386 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP24386 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP24386 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP24386 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 HTR7P1-202ENST00000624664 4411 ntBASIC16.91■□□□□ 0.3
CHMP24386 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 ARMC10P1-201ENST00000313754 855 ntBASIC16.91■□□□□ 0.3
CHMP24386 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CHMP24386 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.91■□□□□ 0.3
CHMP24386 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.91■□□□□ 0.3
CHMP24386 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP24386 AC063952.2-201ENST00000498792 1227 ntBASIC16.91■□□□□ 0.3
CHMP24386 KRT18P35-201ENST00000510488 1269 ntBASIC16.91■□□□□ 0.3
CHMP24386 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP24386 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.91■□□□□ 0.3
CHMP24386 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.91■□□□□ 0.3
CHMP24386 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms