Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ATP4AP20648 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP4AP20648 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP4AP20648 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP4AP20648 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP4AP20648 AC096582.2-201ENST00000510860 516 ntBASIC20.04■□□□□ 0.8
ATP4AP20648 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.04■□□□□ 0.8
ATP4AP20648 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP4AP20648 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP4AP20648 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP4AP20648 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ATP4AP20648 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP4AP20648 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP4AP20648 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATP4AP20648 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ATP4AP20648 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP4AP20648 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP4AP20648 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP4AP20648 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ATP4AP20648 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP4AP20648 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
ATP4AP20648 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP4AP20648 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP4AP20648 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP4AP20648 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP4AP20648 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP4AP20648 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATP4AP20648 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP4AP20648 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.03■□□□□ 0.8
ATP4AP20648 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP4AP20648 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP4AP20648 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.03■□□□□ 0.8
ATP4AP20648 AC009078.2-202ENST00000463353 338 ntBASIC20.03■□□□□ 0.8
ATP4AP20648 AF238378.1-201ENST00000526806 358 ntBASIC20.03■□□□□ 0.8
ATP4AP20648 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP4AP20648 AC114341.1-201ENST00000618070 349 ntBASIC20.03■□□□□ 0.8
ATP4AP20648 REXO1L6P-202ENST00000619970 1078 ntBASIC20.03■□□□□ 0.8
ATP4AP20648 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP4AP20648 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP4AP20648 AC135776.1-201ENST00000319817 2481 ntBASIC20.03■□□□□ 0.8
ATP4AP20648 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP4AP20648 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP4AP20648 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP4AP20648 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP4AP20648 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP4AP20648 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP4AP20648 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
ATP4AP20648 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ATP4AP20648 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ATP4AP20648 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ATP4AP20648 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP4AP20648 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP4AP20648 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP4AP20648 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ATP4AP20648 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP4AP20648 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP4AP20648 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP4AP20648 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP4AP20648 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP4AP20648 AL591684.3-201ENST00000605187 298 ntBASIC20.02■□□□□ 0.8
ATP4AP20648 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP4AP20648 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP4AP20648 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP4AP20648 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP4AP20648 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP4AP20648 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP4AP20648 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATP4AP20648 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP4AP20648 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP4AP20648 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATP4AP20648 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATP4AP20648 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ATP4AP20648 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ATP4AP20648 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP4AP20648 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.02■□□□□ 0.79
ATP4AP20648 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
ATP4AP20648 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP4AP20648 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP4AP20648 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP4AP20648 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP4AP20648 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
ATP4AP20648 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP4AP20648 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP4AP20648 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP4AP20648 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms