Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ERCC2P18074 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 AL133373.2-201ENST00000623187 2828 ntBASIC18.63■□□□□ 0.57
ERCC2P18074 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ERCC2P18074 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC2P18074 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 DUTP2-201ENST00000519164 463 ntBASIC18.62■□□□□ 0.57
ERCC2P18074 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC2P18074 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.62■□□□□ 0.57
ERCC2P18074 AL590326.2-201ENST00000625139 305 ntBASIC18.62■□□□□ 0.57
ERCC2P18074 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ERCC2P18074 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ERCC2P18074 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC2P18074 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
ERCC2P18074 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ERCC2P18074 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ERCC2P18074 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ERCC2P18074 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
ERCC2P18074 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ERCC2P18074 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC2P18074 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ERCC2P18074 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 AC008764.6-201ENST00000595909 2069 ntBASIC18.61■□□□□ 0.57
ERCC2P18074 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.61■□□□□ 0.57
ERCC2P18074 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC2P18074 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.61■□□□□ 0.57
ERCC2P18074 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.61■□□□□ 0.57
ERCC2P18074 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC2P18074 RNF126P1-202ENST00000569893 925 ntBASIC18.61■□□□□ 0.57
ERCC2P18074 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC2P18074 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ERCC2P18074 NOC2LP2-201ENST00000407594 1944 ntBASIC18.61■□□□□ 0.57
ERCC2P18074 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.6■□□□□ 0.57
ERCC2P18074 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.6■□□□□ 0.57
ERCC2P18074 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ERCC2P18074 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ERCC2P18074 AL645929.1-201ENST00000420084 975 ntBASIC18.6■□□□□ 0.57
ERCC2P18074 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms