Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ERCC2P18074 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 AL133373.2-201ENST00000623187 2828 ntBASIC18.63■□□□□ 0.57
ERCC2P18074 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ERCC2P18074 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC2P18074 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 DUTP2-201ENST00000519164 463 ntBASIC18.62■□□□□ 0.57
ERCC2P18074 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC2P18074 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.62■□□□□ 0.57
ERCC2P18074 AL590326.2-201ENST00000625139 305 ntBASIC18.62■□□□□ 0.57
ERCC2P18074 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ERCC2P18074 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ERCC2P18074 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC2P18074 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
ERCC2P18074 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ERCC2P18074 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ERCC2P18074 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC2P18074 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ERCC2P18074 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
ERCC2P18074 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ERCC2P18074 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC2P18074 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ERCC2P18074 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 AC008764.6-201ENST00000595909 2069 ntBASIC18.61■□□□□ 0.57
ERCC2P18074 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.61■□□□□ 0.57
ERCC2P18074 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC2P18074 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.61■□□□□ 0.57
ERCC2P18074 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.61■□□□□ 0.57
ERCC2P18074 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC2P18074 RNF126P1-202ENST00000569893 925 ntBASIC18.61■□□□□ 0.57
ERCC2P18074 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC2P18074 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC2P18074 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC2P18074 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ERCC2P18074 NOC2LP2-201ENST00000407594 1944 ntBASIC18.61■□□□□ 0.57
ERCC2P18074 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.6■□□□□ 0.57
ERCC2P18074 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.6■□□□□ 0.57
ERCC2P18074 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ERCC2P18074 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ERCC2P18074 AL645929.1-201ENST00000420084 975 ntBASIC18.6■□□□□ 0.57
ERCC2P18074 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms