Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.09■□□□□ 0.65
KRT3P12035 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.09■□□□□ 0.65
KRT3P12035 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.09■□□□□ 0.65
KRT3P12035 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT3P12035 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.09■□□□□ 0.65
KRT3P12035 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT3P12035 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
KRT3P12035 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.09■□□□□ 0.65
KRT3P12035 AC068880.1-201ENST00000507289 2297 ntBASIC19.09■□□□□ 0.65
KRT3P12035 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
KRT3P12035 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
KRT3P12035 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
KRT3P12035 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.09■□□□□ 0.65
KRT3P12035 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT3P12035 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT3P12035 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT3P12035 AL391807.1-203ENST00000604392 2365 ntBASIC19.08■□□□□ 0.65
KRT3P12035 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT3P12035 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT3P12035 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT3P12035 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.08■□□□□ 0.65
KRT3P12035 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT3P12035 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
KRT3P12035 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT3P12035 AK4P3-201ENST00000418260 669 ntBASIC19.08■□□□□ 0.64
KRT3P12035 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KRT3P12035 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
KRT3P12035 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT3P12035 AL136038.4-201ENST00000603606 1261 ntBASIC19.08■□□□□ 0.64
KRT3P12035 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT3P12035 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
KRT3P12035 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
KRT3P12035 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT3P12035 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
KRT3P12035 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KRT3P12035 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT3P12035 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT3P12035 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT3P12035 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT3P12035 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
KRT3P12035 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.07■□□□□ 0.64
KRT3P12035 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.07■□□□□ 0.64
KRT3P12035 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
KRT3P12035 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 HOMER2P1-201ENST00000455653 964 ntBASIC19.07■□□□□ 0.64
KRT3P12035 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.07■□□□□ 0.64
KRT3P12035 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.07■□□□□ 0.64
KRT3P12035 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.07■□□□□ 0.64
KRT3P12035 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
KRT3P12035 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
KRT3P12035 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT3P12035 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT3P12035 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT3P12035 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 SLC25A6P5-201ENST00000435663 894 ntBASIC19.06■□□□□ 0.64
KRT3P12035 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 AC104076.2-201ENST00000448912 469 ntBASIC19.06■□□□□ 0.64
KRT3P12035 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.06■□□□□ 0.64
KRT3P12035 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.06■□□□□ 0.64
KRT3P12035 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT3P12035 AC024563.2-201ENST00000603282 481 ntBASIC19.06■□□□□ 0.64
KRT3P12035 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
KRT3P12035 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT3P12035 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
KRT3P12035 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT3P12035 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
KRT3P12035 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT3P12035 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT3P12035 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT3P12035 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT3P12035 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT3P12035 AC132938.6-201ENST00000623828 1655 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms