Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCNAP12004 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCNAP12004 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.65■□□□□ 0.42
PCNAP12004 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.65■□□□□ 0.42
PCNAP12004 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
PCNAP12004 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.65■□□□□ 0.42
PCNAP12004 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.65■□□□□ 0.42
PCNAP12004 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.65■□□□□ 0.42
PCNAP12004 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.65■□□□□ 0.42
PCNAP12004 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.65■□□□□ 0.42
PCNAP12004 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.65■□□□□ 0.42
PCNAP12004 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.65■□□□□ 0.42
PCNAP12004 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCNAP12004 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.65■□□□□ 0.42
PCNAP12004 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCNAP12004 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.65■□□□□ 0.42
PCNAP12004 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCNAP12004 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.65■□□□□ 0.42
PCNAP12004 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCNAP12004 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCNAP12004 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.64■□□□□ 0.42
PCNAP12004 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCNAP12004 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
PCNAP12004 AC008764.6-201ENST00000595909 2069 ntBASIC17.64■□□□□ 0.41
PCNAP12004 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.64■□□□□ 0.41
PCNAP12004 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCNAP12004 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCNAP12004 LIN28AP1-201ENST00000429574 405 ntBASIC17.64■□□□□ 0.41
PCNAP12004 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCNAP12004 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.64■□□□□ 0.41
PCNAP12004 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.64■□□□□ 0.41
PCNAP12004 REXO1L9P-201ENST00000604264 2108 ntBASIC17.64■□□□□ 0.41
PCNAP12004 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.64■□□□□ 0.41
PCNAP12004 AC010240.3-201ENST00000607688 395 ntBASIC17.64■□□□□ 0.41
PCNAP12004 AC073912.3-201ENST00000624414 853 ntBASIC17.64■□□□□ 0.41
PCNAP12004 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.64■□□□□ 0.41
PCNAP12004 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
PCNAP12004 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.64■□□□□ 0.41
PCNAP12004 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PCNAP12004 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.64■□□□□ 0.41
PCNAP12004 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCNAP12004 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.64■□□□□ 0.41
PCNAP12004 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNAP12004 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCNAP12004 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.63■□□□□ 0.41
PCNAP12004 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCNAP12004 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.63■□□□□ 0.41
PCNAP12004 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.63■□□□□ 0.41
PCNAP12004 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.63■□□□□ 0.41
PCNAP12004 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.63■□□□□ 0.41
PCNAP12004 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.63■□□□□ 0.41
PCNAP12004 ECEL1P3-201ENST00000427961 737 ntBASIC17.63■□□□□ 0.41
PCNAP12004 SLC25A3P1-201ENST00000443844 931 ntBASIC17.63■□□□□ 0.41
PCNAP12004 ATP5G1P1-201ENST00000448724 379 ntBASIC17.63■□□□□ 0.41
PCNAP12004 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.63■□□□□ 0.41
PCNAP12004 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.63■□□□□ 0.41
PCNAP12004 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCNAP12004 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.63■□□□□ 0.41
PCNAP12004 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
PCNAP12004 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCNAP12004 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms