Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RARBP10826 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RARBP10826 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RARBP10826 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RARBP10826 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.21■□□□□ 0.83
RARBP10826 RPSAP43-201ENST00000402237 625 ntBASIC20.21■□□□□ 0.83
RARBP10826 GPX1P2-201ENST00000429271 606 ntBASIC20.21■□□□□ 0.83
RARBP10826 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.21■□□□□ 0.83
RARBP10826 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RARBP10826 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RARBP10826 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.21■□□□□ 0.83
RARBP10826 AC040169.1-201ENST00000565382 521 ntBASIC20.21■□□□□ 0.83
RARBP10826 NKAPP1-205ENST00000585790 367 ntBASIC20.21■□□□□ 0.83
RARBP10826 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RARBP10826 MTDHP4-201ENST00000600287 670 ntBASIC20.21■□□□□ 0.83
RARBP10826 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RARBP10826 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.21■□□□□ 0.83
RARBP10826 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RARBP10826 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RARBP10826 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RARBP10826 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RARBP10826 AC018445.3-201ENST00000624177 1945 ntBASIC20.21■□□□□ 0.83
RARBP10826 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RARBP10826 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RARBP10826 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RARBP10826 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RARBP10826 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.21■□□□□ 0.83
RARBP10826 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.2■□□□□ 0.82
RARBP10826 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RARBP10826 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RARBP10826 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RARBP10826 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RARBP10826 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARBP10826 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARBP10826 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RARBP10826 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RARBP10826 DNAJB3-201ENST00000446806 729 ntBASIC20.2■□□□□ 0.82
RARBP10826 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.2■□□□□ 0.82
RARBP10826 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.2■□□□□ 0.82
RARBP10826 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.2■□□□□ 0.82
RARBP10826 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RARBP10826 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.2■□□□□ 0.82
RARBP10826 AC107918.4-202ENST00000641623 219 ntBASIC20.2■□□□□ 0.82
RARBP10826 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RARBP10826 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARBP10826 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RARBP10826 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARBP10826 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.2■□□□□ 0.82
RARBP10826 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RARBP10826 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.2■□□□□ 0.82
RARBP10826 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.2■□□□□ 0.82
RARBP10826 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.19■□□□□ 0.82
RARBP10826 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RARBP10826 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.19■□□□□ 0.82
RARBP10826 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARBP10826 BX323043.1-201ENST00000641006 1765 ntBASIC20.19■□□□□ 0.82
RARBP10826 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RARBP10826 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RARBP10826 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARBP10826 YBX2P1-201ENST00000394192 760 ntBASIC20.19■□□□□ 0.82
RARBP10826 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RARBP10826 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.19■□□□□ 0.82
RARBP10826 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.19■□□□□ 0.82
RARBP10826 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.19■□□□□ 0.82
RARBP10826 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.19■□□□□ 0.82
RARBP10826 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.19■□□□□ 0.82
RARBP10826 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RARBP10826 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.19■□□□□ 0.82
RARBP10826 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RARBP10826 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARBP10826 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RARBP10826 LINC01126-201ENST00000623515 1646 ntBASIC20.19■□□□□ 0.82
RARBP10826 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARBP10826 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.19■□□□□ 0.82
RARBP10826 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.18■□□□□ 0.82
RARBP10826 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RARBP10826 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.18■□□□□ 0.82
RARBP10826 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.18■□□□□ 0.82
RARBP10826 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RARBP10826 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARBP10826 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARBP10826 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARBP10826 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARBP10826 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARBP10826 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.18■□□□□ 0.82
RARBP10826 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.18■□□□□ 0.82
RARBP10826 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.18■□□□□ 0.82
RARBP10826 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.18■□□□□ 0.82
RARBP10826 AC112698.1-201ENST00000510299 916 ntBASIC20.18■□□□□ 0.82
RARBP10826 RNA5SP416-201ENST00000516838 111 ntBASIC20.18■□□□□ 0.82
RARBP10826 UNC93B6-202ENST00000528242 690 ntBASIC20.18■□□□□ 0.82
RARBP10826 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARBP10826 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
RARBP10826 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.18■□□□□ 0.82
RARBP10826 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.18■□□□□ 0.82
RARBP10826 AL139424.1-201ENST00000607572 797 ntBASIC20.18■□□□□ 0.82
RARBP10826 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.18■□□□□ 0.82
RARBP10826 AC079781.4-201ENST00000641908 219 ntBASIC20.18■□□□□ 0.82
RARBP10826 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RARBP10826 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms