Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CTSBP07858 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.11■□□□□ 0.33
CTSBP07858 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.11■□□□□ 0.33
CTSBP07858 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSBP07858 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CTSBP07858 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.11■□□□□ 0.33
CTSBP07858 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CTSBP07858 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CTSBP07858 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CTSBP07858 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 AKR1C7P-201ENST00000305623 895 ntBASIC17.1■□□□□ 0.33
CTSBP07858 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CTSBP07858 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 RCN1P2-201ENST00000398357 915 ntBASIC17.1■□□□□ 0.33
CTSBP07858 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSBP07858 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSBP07858 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.1■□□□□ 0.33
CTSBP07858 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.1■□□□□ 0.33
CTSBP07858 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSBP07858 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CTSBP07858 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CTSBP07858 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSBP07858 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSBP07858 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSBP07858 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.09■□□□□ 0.33
CTSBP07858 AC100803.2-201ENST00000562459 1963 ntBASIC17.09■□□□□ 0.33
CTSBP07858 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CTSBP07858 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.09■□□□□ 0.33
CTSBP07858 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CTSBP07858 AC079781.3-201ENST00000449110 356 ntBASIC17.09■□□□□ 0.33
CTSBP07858 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.09■□□□□ 0.33
CTSBP07858 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.09■□□□□ 0.33
CTSBP07858 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.09■□□□□ 0.33
CTSBP07858 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.09■□□□□ 0.33
CTSBP07858 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.09■□□□□ 0.33
CTSBP07858 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.09■□□□□ 0.33
CTSBP07858 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 AC111152.3-201ENST00000569699 673 ntBASIC17.09■□□□□ 0.33
CTSBP07858 AL138831.2-201ENST00000606564 490 ntBASIC17.09■□□□□ 0.33
CTSBP07858 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CTSBP07858 KRT8P47-201ENST00000604727 1398 ntBASIC17.09■□□□□ 0.33
CTSBP07858 AC125634.1-201ENST00000438758 1403 ntBASIC17.09■□□□□ 0.33
CTSBP07858 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.09■□□□□ 0.33
CTSBP07858 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CTSBP07858 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.09■□□□□ 0.33
CTSBP07858 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.09■□□□□ 0.33
CTSBP07858 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSBP07858 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CTSBP07858 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTSBP07858 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTSBP07858 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTSBP07858 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.08■□□□□ 0.33
CTSBP07858 AP000997.3-201ENST00000623333 2250 ntBASIC17.08■□□□□ 0.33
CTSBP07858 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CTSBP07858 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.08■□□□□ 0.33
CTSBP07858 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.08■□□□□ 0.32
CTSBP07858 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 TP73-AS1-210ENST00000637775 1455 ntBASIC17.08■□□□□ 0.32
CTSBP07858 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTSBP07858 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms