Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR3DP05423 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
POLR3DP05423 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
POLR3DP05423 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR3DP05423 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR3DP05423 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR3DP05423 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
POLR3DP05423 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR3DP05423 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.61■■□□□ 1.05
POLR3DP05423 TSPY12P-201ENST00000421279 868 ntBASIC21.61■■□□□ 1.05
POLR3DP05423 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.61■■□□□ 1.05
POLR3DP05423 KRT17P6-201ENST00000453795 1220 ntBASIC21.61■■□□□ 1.05
POLR3DP05423 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
POLR3DP05423 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.61■■□□□ 1.05
POLR3DP05423 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.61■■□□□ 1.05
POLR3DP05423 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.61■■□□□ 1.05
POLR3DP05423 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
POLR3DP05423 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR3DP05423 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.61■■□□□ 1.05
POLR3DP05423 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.61■■□□□ 1.05
POLR3DP05423 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
POLR3DP05423 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR3DP05423 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
POLR3DP05423 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR3DP05423 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR3DP05423 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
POLR3DP05423 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR3DP05423 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR3DP05423 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR3DP05423 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR3DP05423 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.6■■□□□ 1.05
POLR3DP05423 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.6■■□□□ 1.05
POLR3DP05423 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.6■■□□□ 1.05
POLR3DP05423 UNC93B7-201ENST00000509439 705 ntBASIC21.6■■□□□ 1.05
POLR3DP05423 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
POLR3DP05423 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.6■■□□□ 1.05
POLR3DP05423 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.6■■□□□ 1.05
POLR3DP05423 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.6■■□□□ 1.05
POLR3DP05423 AC111152.3-201ENST00000569699 673 ntBASIC21.6■■□□□ 1.05
POLR3DP05423 AC099336.1-202ENST00000602961 463 ntBASIC21.6■■□□□ 1.05
POLR3DP05423 AC138894.3-201ENST00000603787 634 ntBASIC21.6■■□□□ 1.05
POLR3DP05423 AL732292.2-201ENST00000609649 430 ntBASIC21.6■■□□□ 1.05
POLR3DP05423 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.6■■□□□ 1.05
POLR3DP05423 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR3DP05423 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR3DP05423 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.6■■□□□ 1.05
POLR3DP05423 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR3DP05423 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
POLR3DP05423 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
POLR3DP05423 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
POLR3DP05423 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR3DP05423 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.59■■□□□ 1.05
POLR3DP05423 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.59■■□□□ 1.05
POLR3DP05423 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
POLR3DP05423 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR3DP05423 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR3DP05423 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR3DP05423 AC091607.1-201ENST00000490318 1060 ntBASIC21.59■■□□□ 1.05
POLR3DP05423 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.59■■□□□ 1.05
POLR3DP05423 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.59■■□□□ 1.05
POLR3DP05423 AC138932.1-201ENST00000534164 6830 ntBASIC21.59■■□□□ 1.05
POLR3DP05423 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR3DP05423 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.59■■□□□ 1.05
POLR3DP05423 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.59■■□□□ 1.05
POLR3DP05423 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.59■■□□□ 1.05
POLR3DP05423 AL121772.3-201ENST00000610840 674 ntBASIC21.59■■□□□ 1.05
POLR3DP05423 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.59■■□□□ 1.05
POLR3DP05423 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
POLR3DP05423 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.59■■□□□ 1.05
POLR3DP05423 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR3DP05423 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
POLR3DP05423 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR3DP05423 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR3DP05423 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.59■■□□□ 1.05
POLR3DP05423 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.58■■□□□ 1.05
POLR3DP05423 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
POLR3DP05423 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.58■■□□□ 1.05
POLR3DP05423 TSPY19P-201ENST00000418461 509 ntBASIC21.58■■□□□ 1.05
POLR3DP05423 IGHV3-47-201ENST00000425060 335 ntBASIC21.58■■□□□ 1.05
POLR3DP05423 TSPY18P-201ENST00000441642 509 ntBASIC21.58■■□□□ 1.05
POLR3DP05423 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.58■■□□□ 1.05
POLR3DP05423 AC091304.2-201ENST00000564639 760 ntBASIC21.58■■□□□ 1.05
POLR3DP05423 RN7SL510P-201ENST00000581311 263 ntBASIC21.58■■□□□ 1.05
POLR3DP05423 AP005901.3-202ENST00000581653 237 ntBASIC21.58■■□□□ 1.05
POLR3DP05423 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.58■■□□□ 1.05
POLR3DP05423 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
POLR3DP05423 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms