Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
TCRAP04437 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TCRAP04437 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.8□□□□□ -0.2
TCRAP04437 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.8□□□□□ -0.2
TCRAP04437 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
TCRAP04437 AC233263.1-201ENST00000578059 224 ntBASIC13.8□□□□□ -0.2
TCRAP04437 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
TCRAP04437 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.8□□□□□ -0.2
TCRAP04437 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TCRAP04437 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRAP04437 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TCRAP04437 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.8□□□□□ -0.2
TCRAP04437 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRAP04437 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRAP04437 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
TCRAP04437 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TCRAP04437 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRAP04437 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TCRAP04437 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.8□□□□□ -0.2
TCRAP04437 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRAP04437 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRAP04437 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TCRAP04437 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TCRAP04437 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRAP04437 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRAP04437 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.8□□□□□ -0.2
TCRAP04437 AL163051.1-201ENST00000569214 1512 ntBASIC13.8□□□□□ -0.2
TCRAP04437 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.79□□□□□ -0.2
TCRAP04437 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TCRAP04437 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.79□□□□□ -0.2
TCRAP04437 AL355312.1-201ENST00000407115 2176 ntBASIC13.79□□□□□ -0.2
TCRAP04437 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TCRAP04437 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 CROCCP1-201ENST00000426910 5675 ntBASIC13.79□□□□□ -0.2
TCRAP04437 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TCRAP04437 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.79□□□□□ -0.2
TCRAP04437 AC008040.2-201ENST00000461049 708 ntBASIC13.79□□□□□ -0.2
TCRAP04437 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
TCRAP04437 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.79□□□□□ -0.2
TCRAP04437 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.79□□□□□ -0.2
TCRAP04437 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.79□□□□□ -0.2
TCRAP04437 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.79□□□□□ -0.2
TCRAP04437 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.79□□□□□ -0.2
TCRAP04437 AC130371.2-201ENST00000619443 611 ntBASIC13.79□□□□□ -0.2
TCRAP04437 AL031985.4-201ENST00000642138 673 ntBASIC13.79□□□□□ -0.2
TCRAP04437 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TCRAP04437 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TCRAP04437 KRT16P1-201ENST00000399124 1418 ntBASIC13.79□□□□□ -0.2
TCRAP04437 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.79□□□□□ -0.2
TCRAP04437 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TCRAP04437 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRAP04437 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.79□□□□□ -0.2
TCRAP04437 GPAT2P1-201ENST00000444924 1672 ntBASIC13.79□□□□□ -0.2
TCRAP04437 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRAP04437 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.78□□□□□ -0.2
TCRAP04437 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TCRAP04437 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TCRAP04437 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TCRAP04437 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRAP04437 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRAP04437 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TCRAP04437 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRAP04437 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRAP04437 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRAP04437 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRAP04437 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRAP04437 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.78□□□□□ -0.2
TCRAP04437 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
TCRAP04437 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms