Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CHRNA1P02708 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA1P02708 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CHRNA1P02708 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA1P02708 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA1P02708 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.61■□□□□ 0.73
CHRNA1P02708 AC092910.1-201ENST00000482027 1129 ntBASIC19.61■□□□□ 0.73
CHRNA1P02708 AC092865.5-201ENST00000545435 363 ntBASIC19.61■□□□□ 0.73
CHRNA1P02708 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.61■□□□□ 0.73
CHRNA1P02708 MTDHP4-201ENST00000600287 670 ntBASIC19.61■□□□□ 0.73
CHRNA1P02708 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA1P02708 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA1P02708 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.61■□□□□ 0.73
CHRNA1P02708 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA1P02708 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CHRNA1P02708 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA1P02708 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRNA1P02708 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA1P02708 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA1P02708 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHRNA1P02708 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA1P02708 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRNA1P02708 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CHRNA1P02708 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA1P02708 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.6■□□□□ 0.73
CHRNA1P02708 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNA1P02708 AC098831.1-202ENST00000438821 336 ntBASIC19.6■□□□□ 0.73
CHRNA1P02708 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNA1P02708 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.6■□□□□ 0.73
CHRNA1P02708 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.6■□□□□ 0.73
CHRNA1P02708 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.6■□□□□ 0.73
CHRNA1P02708 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRNA1P02708 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRNA1P02708 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA1P02708 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHRNA1P02708 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA1P02708 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNA1P02708 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA1P02708 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA1P02708 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA1P02708 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA1P02708 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHRNA1P02708 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA1P02708 AC010460.3-201ENST00000511359 1579 ntBASIC19.59■□□□□ 0.73
CHRNA1P02708 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 AC096633.1-201ENST00000422446 749 ntBASIC19.59■□□□□ 0.73
CHRNA1P02708 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA1P02708 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.59■□□□□ 0.73
CHRNA1P02708 PGAM5P1-201ENST00000518923 814 ntBASIC19.59■□□□□ 0.73
CHRNA1P02708 AC034105.1-201ENST00000563488 319 ntBASIC19.59■□□□□ 0.73
CHRNA1P02708 AC008735.5-201ENST00000623544 497 ntBASIC19.59■□□□□ 0.73
CHRNA1P02708 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHRNA1P02708 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
CHRNA1P02708 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA1P02708 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA1P02708 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHRNA1P02708 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.58■□□□□ 0.73
CHRNA1P02708 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRNA1P02708 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CHRNA1P02708 PHGDH-209ENST00000641074 1780 ntBASIC19.58■□□□□ 0.73
CHRNA1P02708 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRNA1P02708 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRNA1P02708 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA1P02708 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA1P02708 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA1P02708 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNA1P02708 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CHRNA1P02708 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNA1P02708 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.58■□□□□ 0.72
CHRNA1P02708 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNA1P02708 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.58■□□□□ 0.72
CHRNA1P02708 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNA1P02708 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CHRNA1P02708 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CHRNA1P02708 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CHRNA1P02708 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CHRNA1P02708 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA1P02708 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNA1P02708 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA1P02708 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA1P02708 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA1P02708 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA1P02708 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA1P02708 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA1P02708 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA1P02708 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA1P02708 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA1P02708 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHRNA1P02708 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms