Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.34□□□□□ -0.11
IFNA1P01562 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
IFNA1P01562 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.34□□□□□ -0.11
IFNA1P01562 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.34□□□□□ -0.11
IFNA1P01562 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
IFNA1P01562 KRT8P32-201ENST00000512863 1461 ntBASIC14.34□□□□□ -0.11
IFNA1P01562 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
IFNA1P01562 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.34□□□□□ -0.11
IFNA1P01562 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.34□□□□□ -0.11
IFNA1P01562 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.34□□□□□ -0.11
IFNA1P01562 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.34□□□□□ -0.11
IFNA1P01562 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
IFNA1P01562 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.34□□□□□ -0.11
IFNA1P01562 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.34□□□□□ -0.11
IFNA1P01562 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
IFNA1P01562 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
IFNA1P01562 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
IFNA1P01562 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IFNA1P01562 AC008406.3-201ENST00000620001 1374 ntBASIC14.34□□□□□ -0.11
IFNA1P01562 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
IFNA1P01562 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.33□□□□□ -0.11
IFNA1P01562 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
IFNA1P01562 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
IFNA1P01562 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
IFNA1P01562 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
IFNA1P01562 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
IFNA1P01562 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.33□□□□□ -0.11
IFNA1P01562 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
IFNA1P01562 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.33□□□□□ -0.12
IFNA1P01562 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.33□□□□□ -0.12
IFNA1P01562 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 AL162727.3-201ENST00000635661 2787 ntBASIC14.33□□□□□ -0.12
IFNA1P01562 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.33□□□□□ -0.12
IFNA1P01562 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 KRT18P55-202ENST00000578578 1546 ntBASIC14.33□□□□□ -0.12
IFNA1P01562 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.33□□□□□ -0.12
IFNA1P01562 GPX1P1-201ENST00000388829 606 ntBASIC14.33□□□□□ -0.12
IFNA1P01562 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.33□□□□□ -0.12
IFNA1P01562 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.33□□□□□ -0.12
IFNA1P01562 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
IFNA1P01562 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
IFNA1P01562 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
IFNA1P01562 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
IFNA1P01562 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
IFNA1P01562 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
IFNA1P01562 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
IFNA1P01562 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
IFNA1P01562 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
IFNA1P01562 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms