Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT33AO76009 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT33AO76009 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT33AO76009 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
KRT33AO76009 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT33AO76009 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT33AO76009 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT33AO76009 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
KRT33AO76009 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT33AO76009 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT33AO76009 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT33AO76009 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
KRT33AO76009 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT33AO76009 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
KRT33AO76009 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT33AO76009 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT33AO76009 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT33AO76009 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT33AO76009 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT33AO76009 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT33AO76009 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT33AO76009 NEK4P2-201ENST00000580004 1012 ntBASIC16.44■□□□□ 0.22
KRT33AO76009 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT33AO76009 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT33AO76009 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT33AO76009 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT33AO76009 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT33AO76009 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
KRT33AO76009 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
KRT33AO76009 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT33AO76009 KRT8P7-201ENST00000533003 1432 ntBASIC16.44■□□□□ 0.22
KRT33AO76009 AC112777.1-201ENST00000540175 1423 ntBASIC16.44■□□□□ 0.22
KRT33AO76009 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT33AO76009 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT33AO76009 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
KRT33AO76009 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT33AO76009 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT33AO76009 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT33AO76009 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT33AO76009 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 TMPOP1-202ENST00000424642 1267 ntBASIC16.43■□□□□ 0.22
KRT33AO76009 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT33AO76009 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT33AO76009 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT33AO76009 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT33AO76009 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT33AO76009 AC024243.1-201ENST00000609234 778 ntBASIC16.43■□□□□ 0.22
KRT33AO76009 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
KRT33AO76009 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT33AO76009 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
KRT33AO76009 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRT33AO76009 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT33AO76009 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT33AO76009 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT33AO76009 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRT33AO76009 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT33AO76009 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT33AO76009 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT33AO76009 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT33AO76009 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT33AO76009 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT33AO76009 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT33AO76009 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT33AO76009 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT33AO76009 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT33AO76009 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT33AO76009 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT33AO76009 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
KRT33AO76009 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT33AO76009 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT33AO76009 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT33AO76009 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.42■□□□□ 0.22
KRT33AO76009 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT33AO76009 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT33AO76009 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT33AO76009 AL138966.2-201ENST00000621997 464 ntBASIC16.42■□□□□ 0.22
KRT33AO76009 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT33AO76009 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT33AO76009 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT33AO76009 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT33AO76009 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms