Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NDUFS3O75489 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFS3O75489 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFS3O75489 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.07■□□□□ 0.48
NDUFS3O75489 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFS3O75489 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.07■□□□□ 0.48
NDUFS3O75489 RASA4DP-201ENST00000460726 1199 ntBASIC18.07■□□□□ 0.48
NDUFS3O75489 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.07■□□□□ 0.48
NDUFS3O75489 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.07■□□□□ 0.48
NDUFS3O75489 AC011558.1-201ENST00000623459 338 ntBASIC18.07■□□□□ 0.48
NDUFS3O75489 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFS3O75489 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFS3O75489 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFS3O75489 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFS3O75489 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NDUFS3O75489 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NDUFS3O75489 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NDUFS3O75489 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFS3O75489 AC073508.3-201ENST00000619697 1419 ntBASIC18.06■□□□□ 0.48
NDUFS3O75489 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NDUFS3O75489 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS3O75489 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS3O75489 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.06■□□□□ 0.48
NDUFS3O75489 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFS3O75489 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS3O75489 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NDUFS3O75489 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS3O75489 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFS3O75489 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS3O75489 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS3O75489 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS3O75489 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NDUFS3O75489 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NDUFS3O75489 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NDUFS3O75489 KRT18P57-201ENST00000443599 1254 ntBASIC18.06■□□□□ 0.48
NDUFS3O75489 YBX1P2-201ENST00000489612 999 ntBASIC18.06■□□□□ 0.48
NDUFS3O75489 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFS3O75489 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.06■□□□□ 0.48
NDUFS3O75489 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
NDUFS3O75489 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFS3O75489 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS3O75489 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
NDUFS3O75489 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NDUFS3O75489 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS3O75489 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS3O75489 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFS3O75489 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS3O75489 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS3O75489 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NDUFS3O75489 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.05■□□□□ 0.48
NDUFS3O75489 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.05■□□□□ 0.48
NDUFS3O75489 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.05■□□□□ 0.48
NDUFS3O75489 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.05■□□□□ 0.48
NDUFS3O75489 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.05■□□□□ 0.48
NDUFS3O75489 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
NDUFS3O75489 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.05■□□□□ 0.48
NDUFS3O75489 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS3O75489 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NDUFS3O75489 AP000997.3-201ENST00000623333 2250 ntBASIC18.05■□□□□ 0.48
NDUFS3O75489 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NDUFS3O75489 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.04■□□□□ 0.48
NDUFS3O75489 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.04■□□□□ 0.48
NDUFS3O75489 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 AC008764.6-201ENST00000595909 2069 ntBASIC18.04■□□□□ 0.48
NDUFS3O75489 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS3O75489 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.04■□□□□ 0.48
NDUFS3O75489 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.04■□□□□ 0.48
NDUFS3O75489 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.04■□□□□ 0.48
NDUFS3O75489 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms