Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF254O75437 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF254O75437 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF254O75437 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.07■□□□□ 0.16
ZNF254O75437 AL353719.1-201ENST00000566847 864 ntBASIC16.07■□□□□ 0.16
ZNF254O75437 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.07■□□□□ 0.16
ZNF254O75437 MIR3180-4-201ENST00000582223 153 ntBASIC16.07■□□□□ 0.16
ZNF254O75437 MIR4674-201ENST00000582457 87 ntBASIC16.07■□□□□ 0.16
ZNF254O75437 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
ZNF254O75437 AC026471.5-201ENST00000615068 467 ntBASIC16.07■□□□□ 0.16
ZNF254O75437 AL023803.3-201ENST00000615559 522 ntBASIC16.07■□□□□ 0.16
ZNF254O75437 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF254O75437 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF254O75437 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 SIRPAP1-201ENST00000448467 1770 ntBASIC16.07■□□□□ 0.16
ZNF254O75437 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF254O75437 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF254O75437 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF254O75437 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
ZNF254O75437 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF254O75437 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.06■□□□□ 0.16
ZNF254O75437 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ZNF254O75437 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF254O75437 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF254O75437 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.06■□□□□ 0.16
ZNF254O75437 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ZNF254O75437 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ZNF254O75437 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ZNF254O75437 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.06■□□□□ 0.16
ZNF254O75437 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF254O75437 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF254O75437 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF254O75437 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ZNF254O75437 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF254O75437 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF254O75437 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ZNF254O75437 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.05■□□□□ 0.16
ZNF254O75437 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ZNF254O75437 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ZNF254O75437 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.05■□□□□ 0.16
ZNF254O75437 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 AL158047.1-201ENST00000445918 881 ntBASIC16.05■□□□□ 0.16
ZNF254O75437 CCR12P-201ENST00000446203 998 ntBASIC16.05■□□□□ 0.16
ZNF254O75437 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.05■□□□□ 0.16
ZNF254O75437 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF254O75437 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.05■□□□□ 0.16
ZNF254O75437 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF254O75437 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF254O75437 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF254O75437 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF254O75437 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF254O75437 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF254O75437 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF254O75437 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
ZNF254O75437 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF254O75437 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms