Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF40O75150 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF40O75150 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF40O75150 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF40O75150 AL121894.2-201ENST00000602977 491 ntBASIC19.55■□□□□ 0.72
RNF40O75150 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
RNF40O75150 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF40O75150 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF40O75150 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF40O75150 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF40O75150 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF40O75150 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF40O75150 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF40O75150 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF40O75150 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF40O75150 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF40O75150 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF40O75150 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF40O75150 AC080080.1-201ENST00000625121 2420 ntBASIC19.54■□□□□ 0.72
RNF40O75150 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
RNF40O75150 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF40O75150 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF40O75150 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF40O75150 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RNF40O75150 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF40O75150 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF40O75150 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF40O75150 KRT18P38-201ENST00000449496 1282 ntBASIC19.54■□□□□ 0.72
RNF40O75150 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF40O75150 KRT126P-201ENST00000549467 1181 ntBASIC19.54■□□□□ 0.72
RNF40O75150 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.54■□□□□ 0.72
RNF40O75150 AC008622.2-201ENST00000617006 1229 ntBASIC19.54■□□□□ 0.72
RNF40O75150 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.54■□□□□ 0.72
RNF40O75150 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF40O75150 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RNF40O75150 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RNF40O75150 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF40O75150 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RNF40O75150 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
RNF40O75150 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF40O75150 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RNF40O75150 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RNF40O75150 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RNF40O75150 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF40O75150 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF40O75150 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RNF40O75150 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF40O75150 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF40O75150 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RNF40O75150 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RNF40O75150 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 KRT18P48-201ENST00000434763 852 ntBASIC19.53■□□□□ 0.72
RNF40O75150 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF40O75150 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RNF40O75150 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF40O75150 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF40O75150 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF40O75150 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF40O75150 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RNF40O75150 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF40O75150 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 AC005332.1-201ENST00000577698 1310 ntBASIC19.52■□□□□ 0.72
RNF40O75150 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF40O75150 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
RNF40O75150 AC012317.2-201ENST00000623305 2251 ntBASIC19.52■□□□□ 0.72
RNF40O75150 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.52■□□□□ 0.72
RNF40O75150 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF40O75150 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF40O75150 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 PRSS44-201ENST00000515154 1146 ntBASIC19.52■□□□□ 0.72
RNF40O75150 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF40O75150 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF40O75150 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms