Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DLX3O60479 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.75■□□□□ 0.43
DLX3O60479 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DLX3O60479 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DLX3O60479 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DLX3O60479 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DLX3O60479 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
DLX3O60479 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.75■□□□□ 0.43
DLX3O60479 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.75■□□□□ 0.43
DLX3O60479 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.75■□□□□ 0.43
DLX3O60479 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DLX3O60479 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DLX3O60479 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.75■□□□□ 0.43
DLX3O60479 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DLX3O60479 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.75■□□□□ 0.43
DLX3O60479 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.74■□□□□ 0.43
DLX3O60479 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.74■□□□□ 0.43
DLX3O60479 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.74■□□□□ 0.43
DLX3O60479 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 INGX-201ENST00000359239 846 ntBASIC17.74■□□□□ 0.43
DLX3O60479 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.74■□□□□ 0.43
DLX3O60479 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.74■□□□□ 0.43
DLX3O60479 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.74■□□□□ 0.43
DLX3O60479 AC008550.1-201ENST00000511500 884 ntBASIC17.74■□□□□ 0.43
DLX3O60479 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.74■□□□□ 0.43
DLX3O60479 MIR4785-201ENST00000585005 73 ntBASIC17.74■□□□□ 0.43
DLX3O60479 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 AC010653.2-201ENST00000623505 997 ntBASIC17.74■□□□□ 0.43
DLX3O60479 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
DLX3O60479 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
DLX3O60479 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
DLX3O60479 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DLX3O60479 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
DLX3O60479 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.73■□□□□ 0.43
DLX3O60479 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.73■□□□□ 0.43
DLX3O60479 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.73■□□□□ 0.43
DLX3O60479 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
DLX3O60479 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
DLX3O60479 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.73■□□□□ 0.43
DLX3O60479 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.73■□□□□ 0.43
DLX3O60479 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.73■□□□□ 0.43
DLX3O60479 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.73■□□□□ 0.43
DLX3O60479 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
DLX3O60479 SEC1P-202ENST00000473944 940 ntBASIC17.73■□□□□ 0.43
DLX3O60479 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.73■□□□□ 0.43
DLX3O60479 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.73■□□□□ 0.43
DLX3O60479 C2orf69P3-201ENST00000565542 1120 ntBASIC17.73■□□□□ 0.43
DLX3O60479 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
DLX3O60479 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
DLX3O60479 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
DLX3O60479 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
DLX3O60479 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.73■□□□□ 0.43
DLX3O60479 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 PCDHA12-202ENST00000613593 2588 ntBASIC17.73■□□□□ 0.43
DLX3O60479 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DLX3O60479 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DLX3O60479 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
DLX3O60479 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DLX3O60479 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
DLX3O60479 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DLX3O60479 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DLX3O60479 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DLX3O60479 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.72■□□□□ 0.43
DLX3O60479 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.72■□□□□ 0.43
DLX3O60479 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms