Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC130371.2-201ENST00000619443 611 ntBASIC16.45■□□□□ 0.22
SSX4O60224 RCC2P6-201ENST00000526625 1557 ntBASIC16.45■□□□□ 0.22
SSX4O60224 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SSX4O60224 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.45■□□□□ 0.22
SSX4O60224 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.45■□□□□ 0.22
SSX4O60224 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.45■□□□□ 0.22
SSX4O60224 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.45■□□□□ 0.22
SSX4O60224 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.44■□□□□ 0.22
SSX4O60224 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SSX4O60224 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.44■□□□□ 0.22
SSX4O60224 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.44■□□□□ 0.22
SSX4O60224 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.44■□□□□ 0.22
SSX4O60224 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SSX4O60224 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 AC004951.3-201ENST00000418645 1148 ntBASIC16.44■□□□□ 0.22
SSX4O60224 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SSX4O60224 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.44■□□□□ 0.22
SSX4O60224 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.44■□□□□ 0.22
SSX4O60224 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SSX4O60224 HLA-A-209ENST00000638375 975 ntBASIC16.44■□□□□ 0.22
SSX4O60224 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.44■□□□□ 0.22
SSX4O60224 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SSX4O60224 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SSX4O60224 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.44■□□□□ 0.22
SSX4O60224 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SSX4O60224 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX4O60224 PCDH8P1-201ENST00000428983 2773 ntBASIC16.43■□□□□ 0.22
SSX4O60224 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.43■□□□□ 0.22
SSX4O60224 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.43■□□□□ 0.22
SSX4O60224 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.43■□□□□ 0.22
SSX4O60224 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
SSX4O60224 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SSX4O60224 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
SSX4O60224 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SSX4O60224 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SSX4O60224 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
SSX4O60224 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SSX4O60224 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.43■□□□□ 0.22
SSX4O60224 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.43■□□□□ 0.22
SSX4O60224 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.43■□□□□ 0.22
SSX4O60224 AP000692.2-201ENST00000608391 879 ntBASIC16.43■□□□□ 0.22
SSX4O60224 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.43■□□□□ 0.22
SSX4O60224 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.43■□□□□ 0.22
SSX4O60224 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.43■□□□□ 0.22
SSX4O60224 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.43■□□□□ 0.22
SSX4O60224 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SSX4O60224 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX4O60224 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.43■□□□□ 0.22
SSX4O60224 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SSX4O60224 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 AL118508.1-201ENST00000613502 2345 ntBASIC16.42■□□□□ 0.22
SSX4O60224 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms