Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPTLC1O15269 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPTLC1O15269 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SPTLC1O15269 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SPTLC1O15269 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPTLC1O15269 KRT18P65-201ENST00000439811 1286 ntBASIC19.33■□□□□ 0.68
SPTLC1O15269 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.33■□□□□ 0.68
SPTLC1O15269 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.33■□□□□ 0.68
SPTLC1O15269 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.33■□□□□ 0.68
SPTLC1O15269 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPTLC1O15269 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.33■□□□□ 0.68
SPTLC1O15269 AC099336.1-202ENST00000602961 463 ntBASIC19.33■□□□□ 0.68
SPTLC1O15269 AC138894.3-201ENST00000603787 634 ntBASIC19.33■□□□□ 0.68
SPTLC1O15269 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.33■□□□□ 0.68
SPTLC1O15269 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.33■□□□□ 0.68
SPTLC1O15269 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPTLC1O15269 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
SPTLC1O15269 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SPTLC1O15269 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SPTLC1O15269 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPTLC1O15269 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPTLC1O15269 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPTLC1O15269 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SPTLC1O15269 AC093010.1-201ENST00000473625 1624 ntBASIC19.33■□□□□ 0.68
SPTLC1O15269 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.32■□□□□ 0.68
SPTLC1O15269 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.32■□□□□ 0.68
SPTLC1O15269 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.32■□□□□ 0.68
SPTLC1O15269 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.32■□□□□ 0.68
SPTLC1O15269 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SPTLC1O15269 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SPTLC1O15269 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SPTLC1O15269 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.32■□□□□ 0.68
SPTLC1O15269 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.32■□□□□ 0.68
SPTLC1O15269 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SPTLC1O15269 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.32■□□□□ 0.68
SPTLC1O15269 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
SPTLC1O15269 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
SPTLC1O15269 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SPTLC1O15269 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTLC1O15269 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.31■□□□□ 0.68
SPTLC1O15269 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SPTLC1O15269 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.31■□□□□ 0.68
SPTLC1O15269 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.31■□□□□ 0.68
SPTLC1O15269 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.31■□□□□ 0.68
SPTLC1O15269 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SPTLC1O15269 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.31■□□□□ 0.68
SPTLC1O15269 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SPTLC1O15269 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.31■□□□□ 0.68
SPTLC1O15269 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SPTLC1O15269 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTLC1O15269 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SPTLC1O15269 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SPTLC1O15269 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTLC1O15269 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTLC1O15269 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTLC1O15269 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.3■□□□□ 0.68
SPTLC1O15269 AL096828.2-201ENST00000567259 1965 ntBASIC19.3■□□□□ 0.68
SPTLC1O15269 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTLC1O15269 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SPTLC1O15269 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTLC1O15269 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTLC1O15269 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTLC1O15269 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SPTLC1O15269 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTLC1O15269 AL022342.1-201ENST00000400363 863 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms