Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.9□□□□□ -0.18
NDUFA4O00483 RN7SL850P-201ENST00000579959 291 ntBASIC13.9□□□□□ -0.18
NDUFA4O00483 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.9□□□□□ -0.18
NDUFA4O00483 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.9□□□□□ -0.18
NDUFA4O00483 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NDUFA4O00483 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.9□□□□□ -0.18
NDUFA4O00483 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
NDUFA4O00483 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.9□□□□□ -0.18
NDUFA4O00483 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.9□□□□□ -0.18
NDUFA4O00483 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NDUFA4O00483 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.9□□□□□ -0.18
NDUFA4O00483 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA4O00483 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.9□□□□□ -0.18
NDUFA4O00483 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NDUFA4O00483 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.9□□□□□ -0.19
NDUFA4O00483 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFA4O00483 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
NDUFA4O00483 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA4O00483 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NDUFA4O00483 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NDUFA4O00483 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFA4O00483 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFA4O00483 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
NDUFA4O00483 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA4O00483 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
NDUFA4O00483 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA4O00483 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA4O00483 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 AC112907.2-201ENST00000448639 330 ntBASIC13.89□□□□□ -0.19
NDUFA4O00483 AC104076.2-201ENST00000448912 469 ntBASIC13.89□□□□□ -0.19
NDUFA4O00483 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.89□□□□□ -0.19
NDUFA4O00483 ZNF444P1-201ENST00000559497 298 ntBASIC13.89□□□□□ -0.19
NDUFA4O00483 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA4O00483 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA4O00483 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.89□□□□□ -0.19
NDUFA4O00483 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFA4O00483 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NDUFA4O00483 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFA4O00483 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA4O00483 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.88□□□□□ -0.19
NDUFA4O00483 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
NDUFA4O00483 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 NOC2LP2-201ENST00000407594 1944 ntBASIC13.88□□□□□ -0.19
NDUFA4O00483 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
NDUFA4O00483 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 HBZP1-201ENST00000354915 429 ntBASIC13.88□□□□□ -0.19
NDUFA4O00483 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms