Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.71■□□□□ 0.43
EIF3FO00303 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.71■□□□□ 0.43
EIF3FO00303 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
EIF3FO00303 AC020763.4-201ENST00000623414 4170 ntBASIC17.71■□□□□ 0.43
EIF3FO00303 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
EIF3FO00303 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.71■□□□□ 0.43
EIF3FO00303 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.71■□□□□ 0.43
EIF3FO00303 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.71■□□□□ 0.43
EIF3FO00303 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 AC007613.1-201ENST00000572811 2597 ntBASIC17.71■□□□□ 0.43
EIF3FO00303 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
EIF3FO00303 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
EIF3FO00303 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
EIF3FO00303 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
EIF3FO00303 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
EIF3FO00303 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
EIF3FO00303 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.7■□□□□ 0.42
EIF3FO00303 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.7■□□□□ 0.42
EIF3FO00303 KRT18P38-201ENST00000449496 1282 ntBASIC17.7■□□□□ 0.42
EIF3FO00303 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
EIF3FO00303 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.7■□□□□ 0.42
EIF3FO00303 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.7■□□□□ 0.42
EIF3FO00303 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.7■□□□□ 0.42
EIF3FO00303 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.7■□□□□ 0.42
EIF3FO00303 HYMAI.1-201ENST00000620949 238 ntBASIC17.7■□□□□ 0.42
EIF3FO00303 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
EIF3FO00303 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.7■□□□□ 0.42
EIF3FO00303 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
EIF3FO00303 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.7■□□□□ 0.42
EIF3FO00303 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EIF3FO00303 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
EIF3FO00303 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
EIF3FO00303 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.69■□□□□ 0.42
EIF3FO00303 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EIF3FO00303 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EIF3FO00303 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.69■□□□□ 0.42
EIF3FO00303 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EIF3FO00303 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EIF3FO00303 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.69■□□□□ 0.42
EIF3FO00303 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EIF3FO00303 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.69■□□□□ 0.42
EIF3FO00303 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EIF3FO00303 LINC00602-201ENST00000629776 2065 ntBASIC17.69■□□□□ 0.42
EIF3FO00303 AC112907.2-201ENST00000448639 330 ntBASIC17.69■□□□□ 0.42
EIF3FO00303 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.69■□□□□ 0.42
EIF3FO00303 AL359075.1-203ENST00000462729 1002 ntBASIC17.69■□□□□ 0.42
EIF3FO00303 AC092597.1-201ENST00000487352 616 ntBASIC17.69■□□□□ 0.42
EIF3FO00303 AC022616.7-201ENST00000525383 220 ntBASIC17.69■□□□□ 0.42
EIF3FO00303 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EIF3FO00303 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.69■□□□□ 0.42
EIF3FO00303 RN7SL850P-201ENST00000579959 291 ntBASIC17.69■□□□□ 0.42
EIF3FO00303 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.69■□□□□ 0.42
EIF3FO00303 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.69■□□□□ 0.42
EIF3FO00303 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.69■□□□□ 0.42
EIF3FO00303 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EIF3FO00303 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
EIF3FO00303 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.69■□□□□ 0.42
EIF3FO00303 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EIF3FO00303 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.69■□□□□ 0.42
EIF3FO00303 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EIF3FO00303 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
EIF3FO00303 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EIF3FO00303 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.69■□□□□ 0.42
EIF3FO00303 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EIF3FO00303 BCL2-203ENST00000589955 5011 ntBASIC17.69■□□□□ 0.42
EIF3FO00303 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
EIF3FO00303 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EIF3FO00303 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EIF3FO00303 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EIF3FO00303 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms