Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR4O00206 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR4O00206 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.92■□□□□ 0.46
TLR4O00206 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.92■□□□□ 0.46
TLR4O00206 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR4O00206 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
TLR4O00206 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TLR4O00206 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR4O00206 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TLR4O00206 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR4O00206 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TLR4O00206 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR4O00206 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR4O00206 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.91■□□□□ 0.46
TLR4O00206 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR4O00206 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.91■□□□□ 0.46
TLR4O00206 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TLR4O00206 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR4O00206 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR4O00206 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TLR4O00206 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR4O00206 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.91■□□□□ 0.46
TLR4O00206 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TLR4O00206 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.91■□□□□ 0.46
TLR4O00206 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.91■□□□□ 0.46
TLR4O00206 FAM197Y8-203ENST00000450145 560 ntBASIC17.91■□□□□ 0.46
TLR4O00206 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.91■□□□□ 0.46
TLR4O00206 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.91■□□□□ 0.46
TLR4O00206 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.91■□□□□ 0.46
TLR4O00206 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.91■□□□□ 0.46
TLR4O00206 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TLR4O00206 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
TLR4O00206 BX640515.1-201ENST00000617215 977 ntBASIC17.91■□□□□ 0.46
TLR4O00206 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TLR4O00206 TP73-AS1-207ENST00000624167 988 ntBASIC17.91■□□□□ 0.46
TLR4O00206 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TLR4O00206 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TLR4O00206 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR4O00206 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR4O00206 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.91■□□□□ 0.46
TLR4O00206 AL138781.2-201ENST00000617896 1843 ntBASIC17.91■□□□□ 0.46
TLR4O00206 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TLR4O00206 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TLR4O00206 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR4O00206 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TLR4O00206 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TLR4O00206 AL024508.2-201ENST00000607749 1894 ntBASIC17.9■□□□□ 0.46
TLR4O00206 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TLR4O00206 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TLR4O00206 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TLR4O00206 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TLR4O00206 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
TLR4O00206 AL590627.1-203ENST00000421194 1026 ntBASIC17.9■□□□□ 0.46
TLR4O00206 AC132008.2-207ENST00000454517 770 ntBASIC17.9■□□□□ 0.46
TLR4O00206 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.9■□□□□ 0.46
TLR4O00206 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.9■□□□□ 0.46
TLR4O00206 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.9■□□□□ 0.46
TLR4O00206 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.9■□□□□ 0.46
TLR4O00206 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.9■□□□□ 0.46
TLR4O00206 AC120114.3-201ENST00000611923 658 ntBASIC17.9■□□□□ 0.46
TLR4O00206 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TLR4O00206 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.9■□□□□ 0.46
TLR4O00206 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.9■□□□□ 0.46
TLR4O00206 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TLR4O00206 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.46
TLR4O00206 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TLR4O00206 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TLR4O00206 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TLR4O00206 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.89■□□□□ 0.45
TLR4O00206 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR4O00206 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR4O00206 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR4O00206 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR4O00206 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TLR4O00206 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.89■□□□□ 0.45
TLR4O00206 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR4O00206 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.89■□□□□ 0.45
TLR4O00206 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR4O00206 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR4O00206 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.89■□□□□ 0.45
TLR4O00206 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TLR4O00206 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.89■□□□□ 0.45
TLR4O00206 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.89■□□□□ 0.45
TLR4O00206 AP001005.1-201ENST00000571755 1248 ntBASIC17.89■□□□□ 0.45
TLR4O00206 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.89■□□□□ 0.45
TLR4O00206 AL773604.1-201ENST00000617417 272 ntBASIC17.89■□□□□ 0.45
TLR4O00206 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TLR4O00206 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR4O00206 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.89■□□□□ 0.45
TLR4O00206 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR4O00206 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR4O00206 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR4O00206 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.89■□□□□ 0.45
TLR4O00206 HCG11-201ENST00000411553 5696 ntBASIC17.89■□□□□ 0.45
TLR4O00206 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TLR4O00206 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.88■□□□□ 0.45
TLR4O00206 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms