Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CCDC189A1A4V9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 TSPY17P-201ENST00000450329 467 ntBASIC18.14■□□□□ 0.49
CCDC189A1A4V9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 AC009065.1-201ENST00000564055 1225 ntBASIC18.14■□□□□ 0.49
CCDC189A1A4V9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 AC090340.1-201ENST00000620778 4980 ntBASIC18.14■□□□□ 0.49
CCDC189A1A4V9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC189A1A4V9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 WWOX-216ENST00000569818 525 ntBASIC18.13■□□□□ 0.49
CCDC189A1A4V9 MIR3180-4-201ENST00000582223 153 ntBASIC18.13■□□□□ 0.49
CCDC189A1A4V9 AC026471.5-201ENST00000615068 467 ntBASIC18.13■□□□□ 0.49
CCDC189A1A4V9 AL023803.3-201ENST00000615559 522 ntBASIC18.13■□□□□ 0.49
CCDC189A1A4V9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC189A1A4V9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 AC008764.6-201ENST00000595909 2069 ntBASIC18.12■□□□□ 0.49
CCDC189A1A4V9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 CRYGFP-201ENST00000418459 633 ntBASIC18.12■□□□□ 0.49
CCDC189A1A4V9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 AD000864.1-201ENST00000624076 2295 ntBASIC18.12■□□□□ 0.49
CCDC189A1A4V9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC189A1A4V9 GMCL1P1-201ENST00000463439 1581 ntBASIC18.12■□□□□ 0.49
CCDC189A1A4V9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms