Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 AC009065.1-201ENST00000564055 1225 ntBASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.81□□□□□ -0.36
TRBV27A0A0K0K1C4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 AC099343.3-201ENST00000605834 2503 ntBASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 B3GAT3P1-201ENST00000471720 806 ntBASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 AP000692.2-201ENST00000608391 879 ntBASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 MIR6786-201ENST00000616843 113 ntBASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 CR392000.1-201ENST00000624770 1228 ntBASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 AC096733.2-201ENST00000609937 1394 ntBASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRBV27A0A0K0K1C4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 CROCCP2-202ENST00000412962 2773 ntBASIC12.79□□□□□ -0.36
TRBV27A0A0K0K1C4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms