Protein–RNA interactions for Protein: Q9Y534

CSDC2, Cold shock domain-containing protein C2, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2Q9Y534 WHAMMP3-201ENST00000611636 1609 ntBASIC17.03■□□□□ 0.32
CSDC2Q9Y534 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSDC2Q9Y534 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSDC2Q9Y534 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSDC2Q9Y534 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.03■□□□□ 0.32
CSDC2Q9Y534 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.03■□□□□ 0.32
CSDC2Q9Y534 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSDC2Q9Y534 AC110285.7-201ENST00000624417 1536 ntBASIC17.02■□□□□ 0.32
CSDC2Q9Y534 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSDC2Q9Y534 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSDC2Q9Y534 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CSDC2Q9Y534 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSDC2Q9Y534 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSDC2Q9Y534 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CSDC2Q9Y534 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.01■□□□□ 0.31
CSDC2Q9Y534 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSDC2Q9Y534 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CSDC2Q9Y534 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CSDC2Q9Y534 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSDC2Q9Y534 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.01■□□□□ 0.31
CSDC2Q9Y534 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSDC2Q9Y534 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.01■□□□□ 0.31
CSDC2Q9Y534 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSDC2Q9Y534 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CSDC2Q9Y534 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17■□□□□ 0.31
CSDC2Q9Y534 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17■□□□□ 0.31
CSDC2Q9Y534 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSDC2Q9Y534 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17■□□□□ 0.31
CSDC2Q9Y534 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17■□□□□ 0.31
CSDC2Q9Y534 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17■□□□□ 0.31
CSDC2Q9Y534 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17■□□□□ 0.31
CSDC2Q9Y534 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17■□□□□ 0.31
CSDC2Q9Y534 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17■□□□□ 0.31
CSDC2Q9Y534 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CSDC2Q9Y534 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSDC2Q9Y534 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CSDC2Q9Y534 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSDC2Q9Y534 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSDC2Q9Y534 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSDC2Q9Y534 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.99■□□□□ 0.31
CSDC2Q9Y534 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.99■□□□□ 0.31
CSDC2Q9Y534 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CSDC2Q9Y534 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSDC2Q9Y534 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CSDC2Q9Y534 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSDC2Q9Y534 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSDC2Q9Y534 AP006261.1-201ENST00000584783 668 ntBASIC16.98■□□□□ 0.31
CSDC2Q9Y534 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSDC2Q9Y534 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSDC2Q9Y534 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSDC2Q9Y534 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSDC2Q9Y534 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSDC2Q9Y534 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSDC2Q9Y534 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSDC2Q9Y534 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSDC2Q9Y534 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSDC2Q9Y534 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CSDC2Q9Y534 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.96■□□□□ 0.31
CSDC2Q9Y534 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.96■□□□□ 0.31
CSDC2Q9Y534 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSDC2Q9Y534 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CSDC2Q9Y534 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CSDC2Q9Y534 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.95■□□□□ 0.3
CSDC2Q9Y534 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSDC2Q9Y534 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSDC2Q9Y534 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSDC2Q9Y534 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.95■□□□□ 0.3
CSDC2Q9Y534 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSDC2Q9Y534 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CSDC2Q9Y534 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSDC2Q9Y534 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSDC2Q9Y534 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSDC2Q9Y534 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CSDC2Q9Y534 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSDC2Q9Y534 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSDC2Q9Y534 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSDC2Q9Y534 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CSDC2Q9Y534 AC010501.1-201ENST00000606270 1962 ntBASIC16.92■□□□□ 0.3
CSDC2Q9Y534 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSDC2Q9Y534 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.92■□□□□ 0.3
CSDC2Q9Y534 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSDC2Q9Y534 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.91■□□□□ 0.3
CSDC2Q9Y534 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.91■□□□□ 0.3
CSDC2Q9Y534 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSDC2Q9Y534 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CSDC2Q9Y534 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSDC2Q9Y534 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSDC2Q9Y534 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSDC2Q9Y534 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSDC2Q9Y534 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CSDC2Q9Y534 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSDC2Q9Y534 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CSDC2Q9Y534 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CSDC2Q9Y534 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.9■□□□□ 0.3
CSDC2Q9Y534 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CSDC2Q9Y534 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CSDC2Q9Y534 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSDC2Q9Y534 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CSDC2Q9Y534 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSDC2Q9Y534 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms