Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.65■■□□□ 1.54
CPSF2Q9P2I0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CPSF2Q9P2I0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
CPSF2Q9P2I0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
CPSF2Q9P2I0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.65■■□□□ 1.54
CPSF2Q9P2I0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CPSF2Q9P2I0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
CPSF2Q9P2I0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.64■■□□□ 1.53
CPSF2Q9P2I0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CPSF2Q9P2I0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CPSF2Q9P2I0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CPSF2Q9P2I0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CPSF2Q9P2I0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.62■■□□□ 1.53
CPSF2Q9P2I0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.62■■□□□ 1.53
CPSF2Q9P2I0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CPSF2Q9P2I0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.62■■□□□ 1.53
CPSF2Q9P2I0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.61■■□□□ 1.53
CPSF2Q9P2I0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.61■■□□□ 1.53
CPSF2Q9P2I0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
CPSF2Q9P2I0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
CPSF2Q9P2I0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF2Q9P2I0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF2Q9P2I0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF2Q9P2I0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.59■■□□□ 1.53
CPSF2Q9P2I0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CPSF2Q9P2I0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CPSF2Q9P2I0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CPSF2Q9P2I0 AC110285.7-201ENST00000624417 1536 ntBASIC24.58■■□□□ 1.53
CPSF2Q9P2I0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.58■■□□□ 1.53
CPSF2Q9P2I0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.58■■□□□ 1.53
CPSF2Q9P2I0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CPSF2Q9P2I0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
CPSF2Q9P2I0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.57■■□□□ 1.52
CPSF2Q9P2I0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.57■■□□□ 1.52
CPSF2Q9P2I0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPSF2Q9P2I0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPSF2Q9P2I0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPSF2Q9P2I0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CPSF2Q9P2I0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.55■■□□□ 1.52
CPSF2Q9P2I0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
CPSF2Q9P2I0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CPSF2Q9P2I0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
CPSF2Q9P2I0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
CPSF2Q9P2I0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF2Q9P2I0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.54■■□□□ 1.52
CPSF2Q9P2I0 AP004609.3-201ENST00000610705 1884 ntBASIC24.54■■□□□ 1.52
CPSF2Q9P2I0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
CPSF2Q9P2I0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.54■■□□□ 1.52
CPSF2Q9P2I0 AC021231.2-201ENST00000594613 730 ntBASIC24.54■■□□□ 1.52
CPSF2Q9P2I0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
CPSF2Q9P2I0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPSF2Q9P2I0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.53■■□□□ 1.52
CPSF2Q9P2I0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.53■■□□□ 1.52
CPSF2Q9P2I0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.53■■□□□ 1.52
CPSF2Q9P2I0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CPSF2Q9P2I0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CPSF2Q9P2I0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CPSF2Q9P2I0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CPSF2Q9P2I0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CPSF2Q9P2I0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.52■■□□□ 1.52
CPSF2Q9P2I0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPSF2Q9P2I0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPSF2Q9P2I0 DUX4L29-201ENST00000425409 679 ntBASIC24.51■■□□□ 1.51
CPSF2Q9P2I0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.51■■□□□ 1.51
CPSF2Q9P2I0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CPSF2Q9P2I0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.5■■□□□ 1.51
CPSF2Q9P2I0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPSF2Q9P2I0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPSF2Q9P2I0 AC145676.1-201ENST00000514988 2004 ntBASIC24.5■■□□□ 1.51
CPSF2Q9P2I0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CPSF2Q9P2I0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPSF2Q9P2I0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.49■■□□□ 1.51
CPSF2Q9P2I0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.49■■□□□ 1.51
CPSF2Q9P2I0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CPSF2Q9P2I0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CPSF2Q9P2I0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CPSF2Q9P2I0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CPSF2Q9P2I0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CPSF2Q9P2I0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CPSF2Q9P2I0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.48■■□□□ 1.51
CPSF2Q9P2I0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CPSF2Q9P2I0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CPSF2Q9P2I0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
CPSF2Q9P2I0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CPSF2Q9P2I0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.46■■□□□ 1.51
CPSF2Q9P2I0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CPSF2Q9P2I0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CPSF2Q9P2I0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CPSF2Q9P2I0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.45■■□□□ 1.5
CPSF2Q9P2I0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.45■■□□□ 1.5
CPSF2Q9P2I0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
CPSF2Q9P2I0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.44■■□□□ 1.5
CPSF2Q9P2I0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CPSF2Q9P2I0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CPSF2Q9P2I0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CPSF2Q9P2I0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CPSF2Q9P2I0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CPSF2Q9P2I0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.43■■□□□ 1.5
CPSF2Q9P2I0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
CPSF2Q9P2I0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms