Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TREM2Q9NZC2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.24■□□□□ 0.99
TREM2Q9NZC2 AC022413.1-201ENST00000624602 984 ntBASIC21.24■□□□□ 0.99
TREM2Q9NZC2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TREM2Q9NZC2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TREM2Q9NZC2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TREM2Q9NZC2 RARRES2P2-201ENST00000394842 485 ntBASIC21.22■□□□□ 0.99
TREM2Q9NZC2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.22■□□□□ 0.99
TREM2Q9NZC2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TREM2Q9NZC2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TREM2Q9NZC2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.22■□□□□ 0.99
TREM2Q9NZC2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TREM2Q9NZC2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TREM2Q9NZC2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TREM2Q9NZC2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TREM2Q9NZC2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
TREM2Q9NZC2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TREM2Q9NZC2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TREM2Q9NZC2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TREM2Q9NZC2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TREM2Q9NZC2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.2■□□□□ 0.98
TREM2Q9NZC2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TREM2Q9NZC2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TREM2Q9NZC2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TREM2Q9NZC2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TREM2Q9NZC2 RNF126P1-201ENST00000567452 1320 ntBASIC21.19■□□□□ 0.98
TREM2Q9NZC2 AC018358.1-201ENST00000631079 1402 ntBASIC21.19■□□□□ 0.98
TREM2Q9NZC2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TREM2Q9NZC2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
TREM2Q9NZC2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.18■□□□□ 0.98
TREM2Q9NZC2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TREM2Q9NZC2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TREM2Q9NZC2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TREM2Q9NZC2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TREM2Q9NZC2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TREM2Q9NZC2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.18■□□□□ 0.98
TREM2Q9NZC2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TREM2Q9NZC2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TREM2Q9NZC2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TREM2Q9NZC2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.17■□□□□ 0.98
TREM2Q9NZC2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TREM2Q9NZC2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TREM2Q9NZC2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.17■□□□□ 0.98
TREM2Q9NZC2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TREM2Q9NZC2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TREM2Q9NZC2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TREM2Q9NZC2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TREM2Q9NZC2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TREM2Q9NZC2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.16■□□□□ 0.98
TREM2Q9NZC2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TREM2Q9NZC2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TREM2Q9NZC2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TREM2Q9NZC2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.15■□□□□ 0.98
TREM2Q9NZC2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.15■□□□□ 0.98
TREM2Q9NZC2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TREM2Q9NZC2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TREM2Q9NZC2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TREM2Q9NZC2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TREM2Q9NZC2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TREM2Q9NZC2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.14■□□□□ 0.97
TREM2Q9NZC2 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.14■□□□□ 0.97
TREM2Q9NZC2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TREM2Q9NZC2 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.14■□□□□ 0.97
TREM2Q9NZC2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TREM2Q9NZC2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TREM2Q9NZC2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TREM2Q9NZC2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TREM2Q9NZC2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TREM2Q9NZC2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TREM2Q9NZC2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TREM2Q9NZC2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TREM2Q9NZC2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TREM2Q9NZC2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TREM2Q9NZC2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TREM2Q9NZC2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TREM2Q9NZC2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TREM2Q9NZC2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TREM2Q9NZC2 ABHD17AP5-201ENST00000580133 923 ntBASIC21.12■□□□□ 0.97
TREM2Q9NZC2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TREM2Q9NZC2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TREM2Q9NZC2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TREM2Q9NZC2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TREM2Q9NZC2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TREM2Q9NZC2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TREM2Q9NZC2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TREM2Q9NZC2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TREM2Q9NZC2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TREM2Q9NZC2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TREM2Q9NZC2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.1■□□□□ 0.97
TREM2Q9NZC2 AC060814.1-201ENST00000554326 538 ntBASIC21.1■□□□□ 0.97
TREM2Q9NZC2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.1■□□□□ 0.97
TREM2Q9NZC2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TREM2Q9NZC2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TREM2Q9NZC2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TREM2Q9NZC2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.09■□□□□ 0.97
TREM2Q9NZC2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TREM2Q9NZC2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TREM2Q9NZC2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.08■□□□□ 0.97
TREM2Q9NZC2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TREM2Q9NZC2 AL359258.2-201ENST00000564063 1566 ntBASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms