Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.17■■□□□ 1.3
YIPF4Q9BSR8 WHAMMP3-201ENST00000611636 1609 ntBASIC23.17■■□□□ 1.3
YIPF4Q9BSR8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
YIPF4Q9BSR8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.16■■□□□ 1.3
YIPF4Q9BSR8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
YIPF4Q9BSR8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.16■■□□□ 1.3
YIPF4Q9BSR8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
YIPF4Q9BSR8 AP004609.3-201ENST00000610705 1884 ntBASIC23.16■■□□□ 1.3
YIPF4Q9BSR8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
YIPF4Q9BSR8 MIR4449-201ENST00000578365 66 ntBASIC23.16■■□□□ 1.3
YIPF4Q9BSR8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
YIPF4Q9BSR8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF4Q9BSR8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
YIPF4Q9BSR8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF4Q9BSR8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF4Q9BSR8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.15■■□□□ 1.3
YIPF4Q9BSR8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF4Q9BSR8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF4Q9BSR8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF4Q9BSR8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF4Q9BSR8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
YIPF4Q9BSR8 AC008813.1-201ENST00000536597 885 ntBASIC23.14■■□□□ 1.29
YIPF4Q9BSR8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.14■■□□□ 1.29
YIPF4Q9BSR8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
YIPF4Q9BSR8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
YIPF4Q9BSR8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.13■■□□□ 1.29
YIPF4Q9BSR8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.13■■□□□ 1.29
YIPF4Q9BSR8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
YIPF4Q9BSR8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
YIPF4Q9BSR8 MIR219A2-201ENST00000608502 1504 ntBASIC23.13■■□□□ 1.29
YIPF4Q9BSR8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
YIPF4Q9BSR8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
YIPF4Q9BSR8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
YIPF4Q9BSR8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.12■■□□□ 1.29
YIPF4Q9BSR8 MIR3648-2-201ENST00000581792 180 ntBASIC23.12■■□□□ 1.29
YIPF4Q9BSR8 AC016575.1-201ENST00000607026 382 ntBASIC23.12■■□□□ 1.29
YIPF4Q9BSR8 MIR3648-1-201ENST00000615959 180 ntBASIC23.12■■□□□ 1.29
YIPF4Q9BSR8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
YIPF4Q9BSR8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
YIPF4Q9BSR8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
YIPF4Q9BSR8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
YIPF4Q9BSR8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.11■■□□□ 1.29
YIPF4Q9BSR8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
YIPF4Q9BSR8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
YIPF4Q9BSR8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
YIPF4Q9BSR8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.1■■□□□ 1.29
YIPF4Q9BSR8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.1■■□□□ 1.29
YIPF4Q9BSR8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
YIPF4Q9BSR8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.1■■□□□ 1.29
YIPF4Q9BSR8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.09■■□□□ 1.29
YIPF4Q9BSR8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.09■■□□□ 1.29
YIPF4Q9BSR8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.09■■□□□ 1.29
YIPF4Q9BSR8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
YIPF4Q9BSR8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
YIPF4Q9BSR8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
YIPF4Q9BSR8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.08■■□□□ 1.29
YIPF4Q9BSR8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
YIPF4Q9BSR8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.07■■□□□ 1.28
YIPF4Q9BSR8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.07■■□□□ 1.28
YIPF4Q9BSR8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.07■■□□□ 1.28
YIPF4Q9BSR8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
YIPF4Q9BSR8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
YIPF4Q9BSR8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
YIPF4Q9BSR8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
YIPF4Q9BSR8 AC148477.6-201ENST00000623746 465 ntBASIC23.06■■□□□ 1.28
YIPF4Q9BSR8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
YIPF4Q9BSR8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
YIPF4Q9BSR8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.06■■□□□ 1.28
YIPF4Q9BSR8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
YIPF4Q9BSR8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
YIPF4Q9BSR8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.05■■□□□ 1.28
YIPF4Q9BSR8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
YIPF4Q9BSR8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
YIPF4Q9BSR8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.04■■□□□ 1.28
YIPF4Q9BSR8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
YIPF4Q9BSR8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.04■■□□□ 1.28
YIPF4Q9BSR8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
YIPF4Q9BSR8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
YIPF4Q9BSR8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
YIPF4Q9BSR8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.04■■□□□ 1.28
YIPF4Q9BSR8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
YIPF4Q9BSR8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
YIPF4Q9BSR8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.03■■□□□ 1.28
YIPF4Q9BSR8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
YIPF4Q9BSR8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
YIPF4Q9BSR8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
YIPF4Q9BSR8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
YIPF4Q9BSR8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
YIPF4Q9BSR8 AC142472.1-201ENST00000612013 1741 ntBASIC23.02■■□□□ 1.28
YIPF4Q9BSR8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
YIPF4Q9BSR8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
YIPF4Q9BSR8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
YIPF4Q9BSR8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
YIPF4Q9BSR8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
YIPF4Q9BSR8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
YIPF4Q9BSR8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23■■□□□ 1.27
YIPF4Q9BSR8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
YIPF4Q9BSR8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23■■□□□ 1.27
YIPF4Q9BSR8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23■■□□□ 1.27
YIPF4Q9BSR8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms