Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.06■■□□□ 1.12
FOXN4Q96NZ1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN4Q96NZ1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
FOXN4Q96NZ1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.05■■□□□ 1.12
FOXN4Q96NZ1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.04■■□□□ 1.12
FOXN4Q96NZ1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN4Q96NZ1 DUX4L13-201ENST00000554103 1267 ntBASIC22.04■■□□□ 1.12
FOXN4Q96NZ1 DUX4L15-201ENST00000611059 1267 ntBASIC22.04■■□□□ 1.12
FOXN4Q96NZ1 DUX4L23-201ENST00000615195 1269 ntBASIC22.04■■□□□ 1.12
FOXN4Q96NZ1 DUX4L24-201ENST00000617576 1269 ntBASIC22.04■■□□□ 1.12
FOXN4Q96NZ1 DUX4L22-201ENST00000618238 1269 ntBASIC22.04■■□□□ 1.12
FOXN4Q96NZ1 DUX4L20-201ENST00000619712 1269 ntBASIC22.04■■□□□ 1.12
FOXN4Q96NZ1 DUX4L21-201ENST00000622058 1269 ntBASIC22.04■■□□□ 1.12
FOXN4Q96NZ1 DUX4L10-201ENST00000622460 1267 ntBASIC22.04■■□□□ 1.12
FOXN4Q96NZ1 DUX4L25-201ENST00000624915 1269 ntBASIC22.04■■□□□ 1.12
FOXN4Q96NZ1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
FOXN4Q96NZ1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXN4Q96NZ1 AP004609.3-201ENST00000610705 1884 ntBASIC22.03■■□□□ 1.12
FOXN4Q96NZ1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXN4Q96NZ1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
FOXN4Q96NZ1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
FOXN4Q96NZ1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.02■■□□□ 1.12
FOXN4Q96NZ1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
FOXN4Q96NZ1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
FOXN4Q96NZ1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
FOXN4Q96NZ1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
FOXN4Q96NZ1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
FOXN4Q96NZ1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.02■■□□□ 1.12
FOXN4Q96NZ1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
FOXN4Q96NZ1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXN4Q96NZ1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXN4Q96NZ1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
FOXN4Q96NZ1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.01■■□□□ 1.11
FOXN4Q96NZ1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXN4Q96NZ1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
FOXN4Q96NZ1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.01■■□□□ 1.11
FOXN4Q96NZ1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22■■□□□ 1.11
FOXN4Q96NZ1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXN4Q96NZ1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXN4Q96NZ1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22■■□□□ 1.11
FOXN4Q96NZ1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22■■□□□ 1.11
FOXN4Q96NZ1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
FOXN4Q96NZ1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXN4Q96NZ1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
FOXN4Q96NZ1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
FOXN4Q96NZ1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
FOXN4Q96NZ1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXN4Q96NZ1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.99■■□□□ 1.11
FOXN4Q96NZ1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXN4Q96NZ1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXN4Q96NZ1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.98■■□□□ 1.11
FOXN4Q96NZ1 WHAMMP3-201ENST00000611636 1609 ntBASIC21.98■■□□□ 1.11
FOXN4Q96NZ1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.98■■□□□ 1.11
FOXN4Q96NZ1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
FOXN4Q96NZ1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN4Q96NZ1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXN4Q96NZ1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN4Q96NZ1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN4Q96NZ1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.96■■□□□ 1.11
FOXN4Q96NZ1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
FOXN4Q96NZ1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
FOXN4Q96NZ1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXN4Q96NZ1 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXN4Q96NZ1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXN4Q96NZ1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXN4Q96NZ1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXN4Q96NZ1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXN4Q96NZ1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
FOXN4Q96NZ1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
FOXN4Q96NZ1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
FOXN4Q96NZ1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.94■■□□□ 1.1
FOXN4Q96NZ1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
FOXN4Q96NZ1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.94■■□□□ 1.1
FOXN4Q96NZ1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXN4Q96NZ1 AC091060.1-201ENST00000623524 1766 ntBASIC21.94■■□□□ 1.1
FOXN4Q96NZ1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXN4Q96NZ1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.93■■□□□ 1.1
FOXN4Q96NZ1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
FOXN4Q96NZ1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
FOXN4Q96NZ1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN4Q96NZ1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN4Q96NZ1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
FOXN4Q96NZ1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXN4Q96NZ1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXN4Q96NZ1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXN4Q96NZ1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXN4Q96NZ1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
FOXN4Q96NZ1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXN4Q96NZ1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXN4Q96NZ1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXN4Q96NZ1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
FOXN4Q96NZ1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.89■■□□□ 1.09
FOXN4Q96NZ1 MIR219A2-201ENST00000608502 1504 ntBASIC21.89■■□□□ 1.09
FOXN4Q96NZ1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXN4Q96NZ1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXN4Q96NZ1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.88■■□□□ 1.09
FOXN4Q96NZ1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXN4Q96NZ1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXN4Q96NZ1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN4Q96NZ1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms