Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
TMC1Q8TDI8 AC012354.3-201ENST00000623734 483 ntBASIC34.53■■■■□ 3.12
TMC1Q8TDI8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
TMC1Q8TDI8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC34.53■■■■□ 3.12
TMC1Q8TDI8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
TMC1Q8TDI8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC34.52■■■■□ 3.12
TMC1Q8TDI8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
TMC1Q8TDI8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
TMC1Q8TDI8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
TMC1Q8TDI8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
TMC1Q8TDI8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
TMC1Q8TDI8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
TMC1Q8TDI8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC34.5■■■■□ 3.11
TMC1Q8TDI8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
TMC1Q8TDI8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
TMC1Q8TDI8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
TMC1Q8TDI8 AC018358.1-201ENST00000631079 1402 ntBASIC34.47■■■■□ 3.11
TMC1Q8TDI8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
TMC1Q8TDI8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
TMC1Q8TDI8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC34.46■■■■□ 3.11
TMC1Q8TDI8 SMPD5-203ENST00000639008 1464 ntBASIC34.46■■■■□ 3.11
TMC1Q8TDI8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
TMC1Q8TDI8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC34.45■■■■□ 3.11
TMC1Q8TDI8 KRT18P60-201ENST00000312876 1297 ntBASIC34.45■■■■□ 3.11
TMC1Q8TDI8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
TMC1Q8TDI8 AC007029.1-201ENST00000604183 313 ntBASIC34.45■■■■□ 3.11
TMC1Q8TDI8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
TMC1Q8TDI8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
TMC1Q8TDI8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC34.44■■■■□ 3.1
TMC1Q8TDI8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
TMC1Q8TDI8 REST-210ENST00000638187 1334 ntTSL 5 BASIC34.44■■■■□ 3.1
TMC1Q8TDI8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC34.44■■■■□ 3.1
TMC1Q8TDI8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
TMC1Q8TDI8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
TMC1Q8TDI8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC34.43■■■■□ 3.1
TMC1Q8TDI8 AL033527.3-201ENST00000566366 1196 ntBASIC34.43■■■■□ 3.1
TMC1Q8TDI8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC34.43■■■■□ 3.1
TMC1Q8TDI8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC34.43■■■■□ 3.1
TMC1Q8TDI8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC34.42■■■■□ 3.1
TMC1Q8TDI8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
TMC1Q8TDI8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
TMC1Q8TDI8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
TMC1Q8TDI8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
TMC1Q8TDI8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
TMC1Q8TDI8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
TMC1Q8TDI8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
TMC1Q8TDI8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC34.4■■■■□ 3.1
TMC1Q8TDI8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC34.4■■■■□ 3.1
TMC1Q8TDI8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC34.4■■■■□ 3.1
TMC1Q8TDI8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
TMC1Q8TDI8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
TMC1Q8TDI8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC34.38■■■■□ 3.09
TMC1Q8TDI8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC34.38■■■■□ 3.09
TMC1Q8TDI8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC34.38■■■■□ 3.09
TMC1Q8TDI8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
TMC1Q8TDI8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
TMC1Q8TDI8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
TMC1Q8TDI8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC34.36■■■■□ 3.09
TMC1Q8TDI8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
TMC1Q8TDI8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC34.36■■■■□ 3.09
TMC1Q8TDI8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
TMC1Q8TDI8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC34.34■■■■□ 3.09
TMC1Q8TDI8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
TMC1Q8TDI8 AC025884.2-201ENST00000553429 711 ntBASIC34.34■■■■□ 3.09
TMC1Q8TDI8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC34.33■■■■□ 3.09
TMC1Q8TDI8 AC009831.1-201ENST00000580420 1582 ntBASIC34.33■■■■□ 3.09
TMC1Q8TDI8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC34.33■■■■□ 3.09
TMC1Q8TDI8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC34.33■■■■□ 3.09
TMC1Q8TDI8 AC004987.1-201ENST00000428627 508 ntBASIC34.33■■■■□ 3.09
TMC1Q8TDI8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC34.33■■■■□ 3.09
TMC1Q8TDI8 AC133552.2-201ENST00000619106 1032 ntBASIC34.33■■■■□ 3.09
TMC1Q8TDI8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC34.32■■■■□ 3.09
TMC1Q8TDI8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.08
TMC1Q8TDI8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
TMC1Q8TDI8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
TMC1Q8TDI8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
TMC1Q8TDI8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.08
TMC1Q8TDI8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
TMC1Q8TDI8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC34.31■■■■□ 3.08
TMC1Q8TDI8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
TMC1Q8TDI8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC34.31■■■■□ 3.08
TMC1Q8TDI8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC34.31■■■■□ 3.08
TMC1Q8TDI8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC34.3■■■■□ 3.08
TMC1Q8TDI8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
TMC1Q8TDI8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
TMC1Q8TDI8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC34.29■■■■□ 3.08
TMC1Q8TDI8 AL592293.1-201ENST00000502889 1188 ntBASIC34.29■■■■□ 3.08
TMC1Q8TDI8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
TMC1Q8TDI8 ATP5G2P3-201ENST00000429083 425 ntBASIC34.28■■■■□ 3.08
TMC1Q8TDI8 BX255925.1-201ENST00000566954 1854 ntBASIC34.28■■■■□ 3.08
TMC1Q8TDI8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
TMC1Q8TDI8 TSPY13P-201ENST00000338964 914 ntBASIC34.26■■■■□ 3.08
TMC1Q8TDI8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
TMC1Q8TDI8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC34.26■■■■□ 3.08
TMC1Q8TDI8 AC026202.3-201ENST00000600805 1127 ntBASIC34.26■■■■□ 3.08
TMC1Q8TDI8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
TMC1Q8TDI8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
TMC1Q8TDI8 GFER-205ENST00000569451 517 ntTSL 5 BASIC34.25■■■■□ 3.07
TMC1Q8TDI8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC34.25■■■■□ 3.07
TMC1Q8TDI8 WHAMMP3-201ENST00000611636 1609 ntBASIC34.25■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms