Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HMCN2Q8NDA2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMCN2Q8NDA2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HMCN2Q8NDA2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMCN2Q8NDA2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HMCN2Q8NDA2 MIR4787-201ENST00000607364 84 ntBASIC14.38□□□□□ -0.11
HMCN2Q8NDA2 KRT125P-201ENST00000546827 989 ntBASIC14.37□□□□□ -0.11
HMCN2Q8NDA2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMCN2Q8NDA2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMCN2Q8NDA2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMCN2Q8NDA2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
HMCN2Q8NDA2 LONRF2P2-201ENST00000439212 571 ntBASIC14.37□□□□□ -0.11
HMCN2Q8NDA2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMCN2Q8NDA2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMCN2Q8NDA2 HYI-210ENST00000486909 905 ntTSL 5 BASIC14.36□□□□□ -0.11
HMCN2Q8NDA2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMCN2Q8NDA2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC14.36□□□□□ -0.11
HMCN2Q8NDA2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMCN2Q8NDA2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMCN2Q8NDA2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.36□□□□□ -0.11
HMCN2Q8NDA2 AL162430.1-201ENST00000480705 870 ntBASIC14.36□□□□□ -0.11
HMCN2Q8NDA2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMCN2Q8NDA2 AC090192.1-201ENST00000517740 490 ntBASIC14.36□□□□□ -0.11
HMCN2Q8NDA2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMCN2Q8NDA2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HMCN2Q8NDA2 AL031432.3-201ENST00000607698 485 ntBASIC14.35□□□□□ -0.11
HMCN2Q8NDA2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.35□□□□□ -0.11
HMCN2Q8NDA2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMCN2Q8NDA2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HMCN2Q8NDA2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMCN2Q8NDA2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC14.35□□□□□ -0.11
HMCN2Q8NDA2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC14.35□□□□□ -0.11
HMCN2Q8NDA2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HMCN2Q8NDA2 AC135983.2-203ENST00000454486 1613 ntBASIC14.34□□□□□ -0.11
HMCN2Q8NDA2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMCN2Q8NDA2 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.34□□□□□ -0.11
HMCN2Q8NDA2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.34□□□□□ -0.11
HMCN2Q8NDA2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMCN2Q8NDA2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HMCN2Q8NDA2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HMCN2Q8NDA2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
HMCN2Q8NDA2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC14.33□□□□□ -0.11
HMCN2Q8NDA2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.33□□□□□ -0.11
HMCN2Q8NDA2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMCN2Q8NDA2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMCN2Q8NDA2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMCN2Q8NDA2 AC127502.1-201ENST00000399971 1502 ntBASIC14.33□□□□□ -0.12
HMCN2Q8NDA2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMCN2Q8NDA2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMCN2Q8NDA2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.32□□□□□ -0.12
HMCN2Q8NDA2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.32□□□□□ -0.12
HMCN2Q8NDA2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMCN2Q8NDA2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMCN2Q8NDA2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMCN2Q8NDA2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMCN2Q8NDA2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.32□□□□□ -0.12
HMCN2Q8NDA2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMCN2Q8NDA2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMCN2Q8NDA2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMCN2Q8NDA2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMCN2Q8NDA2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.31□□□□□ -0.12
HMCN2Q8NDA2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMCN2Q8NDA2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMCN2Q8NDA2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.31□□□□□ -0.12
HMCN2Q8NDA2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC14.3□□□□□ -0.12
HMCN2Q8NDA2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.3□□□□□ -0.12
HMCN2Q8NDA2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMCN2Q8NDA2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMCN2Q8NDA2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMCN2Q8NDA2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HMCN2Q8NDA2 AC093536.1-201ENST00000569153 554 ntBASIC14.3□□□□□ -0.12
HMCN2Q8NDA2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.3□□□□□ -0.12
HMCN2Q8NDA2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMCN2Q8NDA2 KRT16P3-201ENST00000439127 1283 ntBASIC14.3□□□□□ -0.12
HMCN2Q8NDA2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HMCN2Q8NDA2 MIR6821-201ENST00000617625 74 ntBASIC14.29□□□□□ -0.12
HMCN2Q8NDA2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
HMCN2Q8NDA2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMCN2Q8NDA2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC14.29□□□□□ -0.12
HMCN2Q8NDA2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.29□□□□□ -0.12
HMCN2Q8NDA2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.29□□□□□ -0.12
HMCN2Q8NDA2 AL117332.1-201ENST00000622628 974 ntBASIC14.29□□□□□ -0.12
HMCN2Q8NDA2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC14.28□□□□□ -0.12
HMCN2Q8NDA2 MIR4466-201ENST00000606121 54 ntBASIC14.28□□□□□ -0.12
HMCN2Q8NDA2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.28□□□□□ -0.12
HMCN2Q8NDA2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.28□□□□□ -0.12
HMCN2Q8NDA2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMCN2Q8NDA2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMCN2Q8NDA2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC14.28□□□□□ -0.12
HMCN2Q8NDA2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC14.28□□□□□ -0.12
HMCN2Q8NDA2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMCN2Q8NDA2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMCN2Q8NDA2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.27□□□□□ -0.13
HMCN2Q8NDA2 AC010864.1-201ENST00000609407 1511 ntBASIC14.27□□□□□ -0.13
HMCN2Q8NDA2 AL359258.2-201ENST00000564063 1566 ntBASIC14.26□□□□□ -0.13
HMCN2Q8NDA2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HMCN2Q8NDA2 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.26□□□□□ -0.13
HMCN2Q8NDA2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMCN2Q8NDA2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.26□□□□□ -0.13
HMCN2Q8NDA2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms