Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.29■■□□□ 1.64
CHPFQ8IZ52 AC129492.7-201ENST00000622992 756 ntBASIC25.29■■□□□ 1.64
CHPFQ8IZ52 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHPFQ8IZ52 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.29■■□□□ 1.64
CHPFQ8IZ52 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHPFQ8IZ52 AC139426.1-201ENST00000568218 2529 ntBASIC25.28■■□□□ 1.64
CHPFQ8IZ52 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHPFQ8IZ52 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHPFQ8IZ52 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHPFQ8IZ52 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHPFQ8IZ52 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.28■■□□□ 1.64
CHPFQ8IZ52 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.28■■□□□ 1.64
CHPFQ8IZ52 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHPFQ8IZ52 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHPFQ8IZ52 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CHPFQ8IZ52 AC025884.2-201ENST00000553429 711 ntBASIC25.27■■□□□ 1.64
CHPFQ8IZ52 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CHPFQ8IZ52 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CHPFQ8IZ52 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHPFQ8IZ52 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.25■■□□□ 1.63
CHPFQ8IZ52 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.25■■□□□ 1.63
CHPFQ8IZ52 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
CHPFQ8IZ52 AC026202.3-201ENST00000600805 1127 ntBASIC25.25■■□□□ 1.63
CHPFQ8IZ52 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.25■■□□□ 1.63
CHPFQ8IZ52 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHPFQ8IZ52 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
CHPFQ8IZ52 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHPFQ8IZ52 RP9P-202ENST00000450133 1212 ntBASIC25.24■■□□□ 1.63
CHPFQ8IZ52 DUX4L18-201ENST00000553347 1267 ntBASIC25.24■■□□□ 1.63
CHPFQ8IZ52 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHPFQ8IZ52 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CHPFQ8IZ52 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
CHPFQ8IZ52 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
CHPFQ8IZ52 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
CHPFQ8IZ52 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHPFQ8IZ52 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.21■■□□□ 1.63
CHPFQ8IZ52 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHPFQ8IZ52 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHPFQ8IZ52 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.21■■□□□ 1.63
CHPFQ8IZ52 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CHPFQ8IZ52 AC093536.1-201ENST00000569153 554 ntBASIC25.2■■□□□ 1.62
CHPFQ8IZ52 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHPFQ8IZ52 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
CHPFQ8IZ52 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
CHPFQ8IZ52 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHPFQ8IZ52 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.18■■□□□ 1.62
CHPFQ8IZ52 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
CHPFQ8IZ52 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.18■■□□□ 1.62
CHPFQ8IZ52 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.18■■□□□ 1.62
CHPFQ8IZ52 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.18■■□□□ 1.62
CHPFQ8IZ52 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CHPFQ8IZ52 MIR3960-201ENST00000583311 91 ntBASIC25.17■■□□□ 1.62
CHPFQ8IZ52 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
CHPFQ8IZ52 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.17■■□□□ 1.62
CHPFQ8IZ52 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
CHPFQ8IZ52 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHPFQ8IZ52 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHPFQ8IZ52 RARRES2P1-201ENST00000474487 481 ntBASIC25.16■■□□□ 1.62
CHPFQ8IZ52 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.16■■□□□ 1.62
CHPFQ8IZ52 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.16■■□□□ 1.62
CHPFQ8IZ52 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CHPFQ8IZ52 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
CHPFQ8IZ52 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.16■■□□□ 1.62
CHPFQ8IZ52 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHPFQ8IZ52 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHPFQ8IZ52 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHPFQ8IZ52 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHPFQ8IZ52 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHPFQ8IZ52 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
CHPFQ8IZ52 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHPFQ8IZ52 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.14■■□□□ 1.62
CHPFQ8IZ52 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHPFQ8IZ52 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHPFQ8IZ52 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.14■■□□□ 1.62
CHPFQ8IZ52 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
CHPFQ8IZ52 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHPFQ8IZ52 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
CHPFQ8IZ52 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.13■■□□□ 1.61
CHPFQ8IZ52 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHPFQ8IZ52 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHPFQ8IZ52 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.12■■□□□ 1.61
CHPFQ8IZ52 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.12■■□□□ 1.61
CHPFQ8IZ52 DUX4L9-201ENST00000449051 1259 ntBASIC25.12■■□□□ 1.61
CHPFQ8IZ52 RAP2CP1-202ENST00000605179 643 ntBASIC25.12■■□□□ 1.61
CHPFQ8IZ52 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHPFQ8IZ52 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHPFQ8IZ52 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHPFQ8IZ52 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
CHPFQ8IZ52 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHPFQ8IZ52 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHPFQ8IZ52 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHPFQ8IZ52 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHPFQ8IZ52 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHPFQ8IZ52 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.1■■□□□ 1.61
CHPFQ8IZ52 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHPFQ8IZ52 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHPFQ8IZ52 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHPFQ8IZ52 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHPFQ8IZ52 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHPFQ8IZ52 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms