Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.43■■□□□ 1.34
RAB43Q86YS6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAB43Q86YS6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAB43Q86YS6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RAB43Q86YS6 AC018358.1-201ENST00000631079 1402 ntBASIC23.42■■□□□ 1.34
RAB43Q86YS6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB43Q86YS6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
RAB43Q86YS6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAB43Q86YS6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.41■■□□□ 1.34
RAB43Q86YS6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
RAB43Q86YS6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAB43Q86YS6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAB43Q86YS6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.41■■□□□ 1.34
RAB43Q86YS6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.41■■□□□ 1.34
RAB43Q86YS6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
RAB43Q86YS6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAB43Q86YS6 AL359258.2-201ENST00000564063 1566 ntBASIC23.4■■□□□ 1.34
RAB43Q86YS6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAB43Q86YS6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAB43Q86YS6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.4■■□□□ 1.34
RAB43Q86YS6 AL033527.3-201ENST00000566366 1196 ntBASIC23.4■■□□□ 1.34
RAB43Q86YS6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.4■■□□□ 1.34
RAB43Q86YS6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
RAB43Q86YS6 AL139393.2-201ENST00000608721 2025 ntBASIC23.4■■□□□ 1.34
RAB43Q86YS6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RAB43Q86YS6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
RAB43Q86YS6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
RAB43Q86YS6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAB43Q86YS6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.39■■□□□ 1.33
RAB43Q86YS6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RAB43Q86YS6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAB43Q86YS6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
RAB43Q86YS6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAB43Q86YS6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.38■■□□□ 1.33
RAB43Q86YS6 AC007029.1-201ENST00000604183 313 ntBASIC23.38■■□□□ 1.33
RAB43Q86YS6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAB43Q86YS6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.38■■□□□ 1.33
RAB43Q86YS6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAB43Q86YS6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAB43Q86YS6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAB43Q86YS6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAB43Q86YS6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAB43Q86YS6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAB43Q86YS6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RAB43Q86YS6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAB43Q86YS6 KRT18P60-201ENST00000312876 1297 ntBASIC23.37■■□□□ 1.33
RAB43Q86YS6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.37■■□□□ 1.33
RAB43Q86YS6 TSPY13P-201ENST00000338964 914 ntBASIC23.36■■□□□ 1.33
RAB43Q86YS6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
RAB43Q86YS6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RAB43Q86YS6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.35■■□□□ 1.33
RAB43Q86YS6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RAB43Q86YS6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RAB43Q86YS6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RAB43Q86YS6 AP002414.2-202ENST00000590929 1450 ntBASIC23.34■■□□□ 1.33
RAB43Q86YS6 SMPD5-203ENST00000639008 1464 ntBASIC23.34■■□□□ 1.33
RAB43Q86YS6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.34■■□□□ 1.33
RAB43Q86YS6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RAB43Q86YS6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAB43Q86YS6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAB43Q86YS6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAB43Q86YS6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
RAB43Q86YS6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.33■■□□□ 1.32
RAB43Q86YS6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAB43Q86YS6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAB43Q86YS6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAB43Q86YS6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RAB43Q86YS6 ATP5G2P3-201ENST00000429083 425 ntBASIC23.32■■□□□ 1.32
RAB43Q86YS6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.32■■□□□ 1.32
RAB43Q86YS6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.32■■□□□ 1.32
RAB43Q86YS6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RAB43Q86YS6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAB43Q86YS6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAB43Q86YS6 AC004987.1-201ENST00000428627 508 ntBASIC23.31■■□□□ 1.32
RAB43Q86YS6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RAB43Q86YS6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.3■■□□□ 1.32
RAB43Q86YS6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAB43Q86YS6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAB43Q86YS6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.29■■□□□ 1.32
RAB43Q86YS6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.29■■□□□ 1.32
RAB43Q86YS6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RAB43Q86YS6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
RAB43Q86YS6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.29■■□□□ 1.32
RAB43Q86YS6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
RAB43Q86YS6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAB43Q86YS6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAB43Q86YS6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAB43Q86YS6 AC133552.2-201ENST00000619106 1032 ntBASIC23.28■■□□□ 1.32
RAB43Q86YS6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
RAB43Q86YS6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
RAB43Q86YS6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAB43Q86YS6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RAB43Q86YS6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.27■■□□□ 1.32
RAB43Q86YS6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAB43Q86YS6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.27■■□□□ 1.32
RAB43Q86YS6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAB43Q86YS6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RAB43Q86YS6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RAB43Q86YS6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAB43Q86YS6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms