Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NFE4Q86UQ8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NFE4Q86UQ8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.51■□□□□ 0.39
NFE4Q86UQ8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFE4Q86UQ8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFE4Q86UQ8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.51■□□□□ 0.39
NFE4Q86UQ8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.51■□□□□ 0.39
NFE4Q86UQ8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFE4Q86UQ8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFE4Q86UQ8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NFE4Q86UQ8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFE4Q86UQ8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFE4Q86UQ8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFE4Q86UQ8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.5■□□□□ 0.39
NFE4Q86UQ8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.5■□□□□ 0.39
NFE4Q86UQ8 DUX4L11-201ENST00000611504 1267 ntBASIC17.5■□□□□ 0.39
NFE4Q86UQ8 DUX4L12-201ENST00000614593 1267 ntBASIC17.5■□□□□ 0.39
NFE4Q86UQ8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.5■□□□□ 0.39
NFE4Q86UQ8 DUX4L14-201ENST00000621227 1267 ntBASIC17.5■□□□□ 0.39
NFE4Q86UQ8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.5■□□□□ 0.39
NFE4Q86UQ8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.5■□□□□ 0.39
NFE4Q86UQ8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.5■□□□□ 0.39
NFE4Q86UQ8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.49■□□□□ 0.39
NFE4Q86UQ8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFE4Q86UQ8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFE4Q86UQ8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFE4Q86UQ8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFE4Q86UQ8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFE4Q86UQ8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NFE4Q86UQ8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NFE4Q86UQ8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NFE4Q86UQ8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NFE4Q86UQ8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.48■□□□□ 0.39
NFE4Q86UQ8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NFE4Q86UQ8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.47■□□□□ 0.39
NFE4Q86UQ8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
NFE4Q86UQ8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NFE4Q86UQ8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NFE4Q86UQ8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NFE4Q86UQ8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NFE4Q86UQ8 AC093323.1-202ENST00000635031 2045 ntBASIC17.47■□□□□ 0.39
NFE4Q86UQ8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NFE4Q86UQ8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NFE4Q86UQ8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.46■□□□□ 0.39
NFE4Q86UQ8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NFE4Q86UQ8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NFE4Q86UQ8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.46■□□□□ 0.39
NFE4Q86UQ8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.46■□□□□ 0.39
NFE4Q86UQ8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.46■□□□□ 0.39
NFE4Q86UQ8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.46■□□□□ 0.38
NFE4Q86UQ8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.45■□□□□ 0.38
NFE4Q86UQ8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NFE4Q86UQ8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFE4Q86UQ8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.45■□□□□ 0.38
NFE4Q86UQ8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NFE4Q86UQ8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NFE4Q86UQ8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFE4Q86UQ8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NFE4Q86UQ8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NFE4Q86UQ8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.44■□□□□ 0.38
NFE4Q86UQ8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NFE4Q86UQ8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NFE4Q86UQ8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFE4Q86UQ8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFE4Q86UQ8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NFE4Q86UQ8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NFE4Q86UQ8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.43■□□□□ 0.38
NFE4Q86UQ8 MIR3648-2-201ENST00000581792 180 ntBASIC17.43■□□□□ 0.38
NFE4Q86UQ8 MIR3648-1-201ENST00000615959 180 ntBASIC17.43■□□□□ 0.38
NFE4Q86UQ8 AP002414.2-202ENST00000590929 1450 ntBASIC17.43■□□□□ 0.38
NFE4Q86UQ8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.42■□□□□ 0.38
NFE4Q86UQ8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NFE4Q86UQ8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NFE4Q86UQ8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFE4Q86UQ8 MIR639-201ENST00000384974 98 ntBASIC17.42■□□□□ 0.38
NFE4Q86UQ8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFE4Q86UQ8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFE4Q86UQ8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFE4Q86UQ8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NFE4Q86UQ8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NFE4Q86UQ8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.41■□□□□ 0.38
NFE4Q86UQ8 DUX4L13-201ENST00000554103 1267 ntBASIC17.41■□□□□ 0.38
NFE4Q86UQ8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.41■□□□□ 0.38
NFE4Q86UQ8 DUX4L15-201ENST00000611059 1267 ntBASIC17.41■□□□□ 0.38
NFE4Q86UQ8 DUX4L23-201ENST00000615195 1269 ntBASIC17.41■□□□□ 0.38
NFE4Q86UQ8 DUX4L24-201ENST00000617576 1269 ntBASIC17.41■□□□□ 0.38
NFE4Q86UQ8 DUX4L22-201ENST00000618238 1269 ntBASIC17.41■□□□□ 0.38
NFE4Q86UQ8 DUX4L20-201ENST00000619712 1269 ntBASIC17.41■□□□□ 0.38
NFE4Q86UQ8 DUX4L21-201ENST00000622058 1269 ntBASIC17.41■□□□□ 0.38
NFE4Q86UQ8 DUX4L10-201ENST00000622460 1267 ntBASIC17.41■□□□□ 0.38
NFE4Q86UQ8 DUX4L25-201ENST00000624915 1269 ntBASIC17.41■□□□□ 0.38
NFE4Q86UQ8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NFE4Q86UQ8 LINC00273-201ENST00000539813 1452 ntBASIC17.4■□□□□ 0.38
NFE4Q86UQ8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NFE4Q86UQ8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NFE4Q86UQ8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NFE4Q86UQ8 DUSP8P4-201ENST00000399538 1761 ntBASIC17.4■□□□□ 0.38
NFE4Q86UQ8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NFE4Q86UQ8 AC100797.4-201ENST00000631653 1827 ntBASIC17.4■□□□□ 0.38
NFE4Q86UQ8 AC127502.1-201ENST00000399971 1502 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms