Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HIST3H2AQ7L7L0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
HIST3H2AQ7L7L0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HIST3H2AQ7L7L0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.39■■□□□ 1.18
HIST3H2AQ7L7L0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HIST3H2AQ7L7L0 AC008813.1-201ENST00000536597 885 ntBASIC22.39■■□□□ 1.17
HIST3H2AQ7L7L0 WHAMMP3-201ENST00000611636 1609 ntBASIC22.39■■□□□ 1.17
HIST3H2AQ7L7L0 AL449106.1-201ENST00000608517 1980 ntBASIC22.38■■□□□ 1.17
HIST3H2AQ7L7L0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HIST3H2AQ7L7L0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HIST3H2AQ7L7L0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HIST3H2AQ7L7L0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HIST3H2AQ7L7L0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.36■■□□□ 1.17
HIST3H2AQ7L7L0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HIST3H2AQ7L7L0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HIST3H2AQ7L7L0 AP004609.3-201ENST00000610705 1884 ntBASIC22.35■■□□□ 1.17
HIST3H2AQ7L7L0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HIST3H2AQ7L7L0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.35■■□□□ 1.17
HIST3H2AQ7L7L0 ABHD17AP4-201ENST00000411545 909 ntBASIC22.35■■□□□ 1.17
HIST3H2AQ7L7L0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.35■■□□□ 1.17
HIST3H2AQ7L7L0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.35■■□□□ 1.17
HIST3H2AQ7L7L0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HIST3H2AQ7L7L0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HIST3H2AQ7L7L0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.34■■□□□ 1.17
HIST3H2AQ7L7L0 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.34■■□□□ 1.17
HIST3H2AQ7L7L0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HIST3H2AQ7L7L0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HIST3H2AQ7L7L0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST3H2AQ7L7L0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.33■■□□□ 1.17
HIST3H2AQ7L7L0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HIST3H2AQ7L7L0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.33■■□□□ 1.17
HIST3H2AQ7L7L0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST3H2AQ7L7L0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST3H2AQ7L7L0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST3H2AQ7L7L0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.33■■□□□ 1.17
HIST3H2AQ7L7L0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HIST3H2AQ7L7L0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
HIST3H2AQ7L7L0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
HIST3H2AQ7L7L0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
HIST3H2AQ7L7L0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.32■■□□□ 1.16
HIST3H2AQ7L7L0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIST3H2AQ7L7L0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
HIST3H2AQ7L7L0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.32■■□□□ 1.16
HIST3H2AQ7L7L0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
HIST3H2AQ7L7L0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.32■■□□□ 1.16
HIST3H2AQ7L7L0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.32■■□□□ 1.16
HIST3H2AQ7L7L0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HIST3H2AQ7L7L0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.31■■□□□ 1.16
HIST3H2AQ7L7L0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIST3H2AQ7L7L0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.3■■□□□ 1.16
HIST3H2AQ7L7L0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
HIST3H2AQ7L7L0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
HIST3H2AQ7L7L0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
HIST3H2AQ7L7L0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
HIST3H2AQ7L7L0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.29■■□□□ 1.16
HIST3H2AQ7L7L0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIST3H2AQ7L7L0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIST3H2AQ7L7L0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIST3H2AQ7L7L0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIST3H2AQ7L7L0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HIST3H2AQ7L7L0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIST3H2AQ7L7L0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIST3H2AQ7L7L0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
HIST3H2AQ7L7L0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST3H2AQ7L7L0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.28■■□□□ 1.16
HIST3H2AQ7L7L0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.28■■□□□ 1.16
HIST3H2AQ7L7L0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST3H2AQ7L7L0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.28■■□□□ 1.16
HIST3H2AQ7L7L0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST3H2AQ7L7L0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HIST3H2AQ7L7L0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HIST3H2AQ7L7L0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HIST3H2AQ7L7L0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HIST3H2AQ7L7L0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
HIST3H2AQ7L7L0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HIST3H2AQ7L7L0 AC142472.1-201ENST00000612013 1741 ntBASIC22.26■■□□□ 1.15
HIST3H2AQ7L7L0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
HIST3H2AQ7L7L0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST3H2AQ7L7L0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST3H2AQ7L7L0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.26■■□□□ 1.15
HIST3H2AQ7L7L0 AC148477.6-201ENST00000623746 465 ntBASIC22.26■■□□□ 1.15
HIST3H2AQ7L7L0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST3H2AQ7L7L0 MIR219A2-201ENST00000608502 1504 ntBASIC22.26■■□□□ 1.15
HIST3H2AQ7L7L0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HIST3H2AQ7L7L0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.25■■□□□ 1.15
HIST3H2AQ7L7L0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
HIST3H2AQ7L7L0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.25■■□□□ 1.15
HIST3H2AQ7L7L0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HIST3H2AQ7L7L0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST3H2AQ7L7L0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST3H2AQ7L7L0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HIST3H2AQ7L7L0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.25■■□□□ 1.15
HIST3H2AQ7L7L0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST3H2AQ7L7L0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.24■■□□□ 1.15
HIST3H2AQ7L7L0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HIST3H2AQ7L7L0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.24■■□□□ 1.15
HIST3H2AQ7L7L0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
HIST3H2AQ7L7L0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HIST3H2AQ7L7L0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.23■■□□□ 1.15
HIST3H2AQ7L7L0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms