Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.31■■□□□ 1.16
TMEM53Q6P2H8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TMEM53Q6P2H8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TMEM53Q6P2H8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TMEM53Q6P2H8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
TMEM53Q6P2H8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TMEM53Q6P2H8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TMEM53Q6P2H8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.3■■□□□ 1.16
TMEM53Q6P2H8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
TMEM53Q6P2H8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TMEM53Q6P2H8 AC100797.4-201ENST00000631653 1827 ntBASIC22.3■■□□□ 1.16
TMEM53Q6P2H8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.3■■□□□ 1.16
TMEM53Q6P2H8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TMEM53Q6P2H8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TMEM53Q6P2H8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.29■■□□□ 1.16
TMEM53Q6P2H8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMEM53Q6P2H8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMEM53Q6P2H8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TMEM53Q6P2H8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.28■■□□□ 1.16
TMEM53Q6P2H8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMEM53Q6P2H8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TMEM53Q6P2H8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TMEM53Q6P2H8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMEM53Q6P2H8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMEM53Q6P2H8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
TMEM53Q6P2H8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMEM53Q6P2H8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM53Q6P2H8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM53Q6P2H8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM53Q6P2H8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.26■■□□□ 1.15
TMEM53Q6P2H8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM53Q6P2H8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM53Q6P2H8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 DUX4L11-201ENST00000611504 1267 ntBASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 DUX4L12-201ENST00000614593 1267 ntBASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 DUX4L14-201ENST00000621227 1267 ntBASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
TMEM53Q6P2H8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.24■■□□□ 1.15
TMEM53Q6P2H8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TMEM53Q6P2H8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.24■■□□□ 1.15
TMEM53Q6P2H8 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.24■■□□□ 1.15
TMEM53Q6P2H8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TMEM53Q6P2H8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TMEM53Q6P2H8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TMEM53Q6P2H8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
TMEM53Q6P2H8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
TMEM53Q6P2H8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.23■■□□□ 1.15
TMEM53Q6P2H8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.23■■□□□ 1.15
TMEM53Q6P2H8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEM53Q6P2H8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.22■■□□□ 1.15
TMEM53Q6P2H8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 DUX4L13-201ENST00000554103 1267 ntBASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 DUX4L15-201ENST00000611059 1267 ntBASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 DUX4L23-201ENST00000615195 1269 ntBASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 DUX4L24-201ENST00000617576 1269 ntBASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 DUX4L22-201ENST00000618238 1269 ntBASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 DUX4L20-201ENST00000619712 1269 ntBASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 DUX4L21-201ENST00000622058 1269 ntBASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 DUX4L10-201ENST00000622460 1267 ntBASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 DUX4L25-201ENST00000624915 1269 ntBASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM53Q6P2H8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
TMEM53Q6P2H8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
TMEM53Q6P2H8 DRD5P2-201ENST00000421395 2012 ntBASIC22.2■■□□□ 1.14
TMEM53Q6P2H8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.2■■□□□ 1.14
TMEM53Q6P2H8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TMEM53Q6P2H8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TMEM53Q6P2H8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TMEM53Q6P2H8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 MIR7108-201ENST00000614319 87 ntBASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 AC110285.7-201ENST00000624417 1536 ntBASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM53Q6P2H8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms