Protein–RNA interactions for Protein: Q03855

TY1B-DR1, Transposon Ty1-DR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR1Q03855 ECM19YLR390W 339 nt10.52□□□□□ -0.72
TY1B-DR1Q03855 SGF29YCL010C 780 nt10.52□□□□□ -0.72
TY1B-DR1Q03855 YRB2YIL063C 984 nt10.52□□□□□ -0.73
TY1B-DR1Q03855 VPS24YKL041W 675 nt10.51□□□□□ -0.73
TY1B-DR1Q03855 DOT1YDR440W 1749 nt10.5□□□□□ -0.73
TY1B-DR1Q03855 YNL017CYNL017C 339 nt10.5□□□□□ -0.73
TY1B-DR1Q03855 YGL260WYGL260W 231 nt10.49□□□□□ -0.73
TY1B-DR1Q03855 ADE2YOR128C 1716 nt10.49□□□□□ -0.73
TY1B-DR1Q03855 YHR213W-AYHR213W-A 234 nt10.49□□□□□ -0.73
TY1B-DR1Q03855 YDR327WYDR327W 327 nt10.48□□□□□ -0.73
TY1B-DR1Q03855 YDL218WYDL218W 954 nt10.47□□□□□ -0.73
TY1B-DR1Q03855 SYF2YGR129W 648 nt10.47□□□□□ -0.73
TY1B-DR1Q03855 SNF7YLR025W 723 nt10.47□□□□□ -0.73
TY1B-DR1Q03855 MSO1YNR049C 633 nt10.47□□□□□ -0.73
TY1B-DR1Q03855 ZRT2YLR130C 1269 nt10.44□□□□□ -0.74
TY1B-DR1Q03855 RUP1YOR138C 2016 nt10.44□□□□□ -0.74
TY1B-DR1Q03855 VBA5YKR105C 1749 nt10.44□□□□□ -0.74
TY1B-DR1Q03855 KSH1YNL024C-A 219 nt10.42□□□□□ -0.74
TY1B-DR1Q03855 SNN1YNL086W 309 nt10.42□□□□□ -0.74
TY1B-DR1Q03855 ENV7YPL236C 1095 nt10.42□□□□□ -0.74
TY1B-DR1Q03855 YDL172CYDL172C 480 nt10.4□□□□□ -0.74
TY1B-DR1Q03855 CBR1YIL043C 855 nt10.4□□□□□ -0.74
TY1B-DR1Q03855 FRA1YLL029W 2250 nt10.39□□□□□ -0.75
TY1B-DR1Q03855 YLR126CYLR126C 756 nt10.39□□□□□ -0.75
TY1B-DR1Q03855 ELA1YNL230C 1140 nt10.39□□□□□ -0.75
TY1B-DR1Q03855 TCB1YOR086C 3561 nt10.39□□□□□ -0.75
TY1B-DR1Q03855 DUR3YHL016C 2208 nt10.39□□□□□ -0.75
TY1B-DR1Q03855 PSR2YLR019W 1194 nt10.39□□□□□ -0.75
TY1B-DR1Q03855 DFM1YDR411C 1026 nt10.38□□□□□ -0.75
TY1B-DR1Q03855 YNL200CYNL200C 741 nt10.38□□□□□ -0.75
TY1B-DR1Q03855 HBS1YKR084C 1836 nt10.37□□□□□ -0.75
TY1B-DR1Q03855 SIT4YDL047W 936 nt10.37□□□□□ -0.75
TY1B-DR1Q03855 SDH4YDR178W 546 nt10.37□□□□□ -0.75
TY1B-DR1Q03855 ERP5YHR110W 639 nt10.37□□□□□ -0.75
TY1B-DR1Q03855 ERG1YGR175C 1491 nt10.36□□□□□ -0.75
TY1B-DR1Q03855 YHK8YHR048W 1545 nt10.36□□□□□ -0.75
TY1B-DR1Q03855 DID2YKR035W-A 615 nt10.36□□□□□ -0.75
TY1B-DR1Q03855 MTF2YDL044C 1323 nt10.35□□□□□ -0.75
TY1B-DR1Q03855 PHO85YPL031C 918 nt10.34□□□□□ -0.75
TY1B-DR1Q03855 SWD1YAR003W 1281 nt10.34□□□□□ -0.75
TY1B-DR1Q03855 NUP57YGR119C 1626 nt10.34□□□□□ -0.75
TY1B-DR1Q03855 SGF73YGL066W 1974 nt10.34□□□□□ -0.75
TY1B-DR1Q03855 IRC5YFR038W 2562 nt10.34□□□□□ -0.75
TY1B-DR1Q03855 COQ1YBR003W 1422 nt10.33□□□□□ -0.76
TY1B-DR1Q03855 PPH22YDL188C 1134 nt10.33□□□□□ -0.76
TY1B-DR1Q03855 YBR056C-BYBR056C-B 159 nt10.33□□□□□ -0.76
TY1B-DR1Q03855 EXG2YDR261C 1689 nt10.33□□□□□ -0.76
TY1B-DR1Q03855 DOT5YIL010W 648 nt10.32□□□□□ -0.76
TY1B-DR1Q03855 PRY3YJL078C 2646 nt10.32□□□□□ -0.76
TY1B-DR1Q03855 RSC9YML127W 1746 nt10.31□□□□□ -0.76
TY1B-DR1Q03855 HEM2YGL040C 1029 nt10.31□□□□□ -0.76
TY1B-DR1Q03855 NHA1YLR138W 2958 nt10.3□□□□□ -0.76
TY1B-DR1Q03855 SCS7YMR272C 1155 nt10.3□□□□□ -0.76
TY1B-DR1Q03855 SHP1YBL058W 1272 nt10.3□□□□□ -0.76
TY1B-DR1Q03855 RPN11YFR004W 921 nt10.29□□□□□ -0.76
TY1B-DR1Q03855 PTC3YBL056W 1407 nt10.28□□□□□ -0.76
TY1B-DR1Q03855 MSG5YNL053W 1470 nt10.28□□□□□ -0.76
TY1B-DR1Q03855 PTC4YBR125C 1182 nt10.28□□□□□ -0.76
TY1B-DR1Q03855 GCV3YAL044C 513 nt10.27□□□□□ -0.77
TY1B-DR1Q03855 YGR054WYGR054W 1929 nt10.27□□□□□ -0.77
TY1B-DR1Q03855 MNS1YJR131W 1650 nt10.26□□□□□ -0.77
TY1B-DR1Q03855 HEL2YDR266C 1920 nt10.26□□□□□ -0.77
TY1B-DR1Q03855 YSC83YHR017W 1158 nt10.26□□□□□ -0.77
TY1B-DR1Q03855 CCT8YJL008C 1707 nt10.25□□□□□ -0.77
TY1B-DR1Q03855 MDH2YOL126C 1134 nt10.24□□□□□ -0.77
TY1B-DR1Q03855 YMR034CYMR034C 1305 nt10.24□□□□□ -0.77
TY1B-DR1Q03855 CDC23YHR166C 1881 nt10.22□□□□□ -0.77
TY1B-DR1Q03855 URH1YDR400W 1023 nt10.22□□□□□ -0.77
TY1B-DR1Q03855 YOR072WYOR072W 315 nt10.21□□□□□ -0.77
TY1B-DR1Q03855 RVB2YPL235W 1416 nt10.21□□□□□ -0.77
TY1B-DR1Q03855 RPL10YLR075W 666 nt10.21□□□□□ -0.78
TY1B-DR1Q03855 ATP10YLR393W 840 nt10.21□□□□□ -0.78
TY1B-DR1Q03855 MRPS12YNR036C 462 nt10.21□□□□□ -0.78
TY1B-DR1Q03855 YDR015CYDR015C 240 nt10.2□□□□□ -0.78
TY1B-DR1Q03855 GNA1YFL017C 480 nt10.2□□□□□ -0.78
TY1B-DR1Q03855 BUD32YGR262C 786 nt10.2□□□□□ -0.78
TY1B-DR1Q03855 FCP1YMR277W 2199 nt10.19□□□□□ -0.78
TY1B-DR1Q03855 TIM22YDL217C 624 nt10.19□□□□□ -0.78
TY1B-DR1Q03855 RSC30YHR056C 2652 nt10.19□□□□□ -0.78
TY1B-DR1Q03855 MLS1YNL117W 1665 nt10.19□□□□□ -0.78
TY1B-DR1Q03855 UTP4YDR324C 2331 nt10.18□□□□□ -0.78
TY1B-DR1Q03855 SRL2YLR082C 1179 nt10.18□□□□□ -0.78
TY1B-DR1Q03855 GLC8YMR311C 690 nt10.18□□□□□ -0.78
TY1B-DR1Q03855 AMN1YBR158W 1650 nt10.17□□□□□ -0.78
TY1B-DR1Q03855 PMT7YDR307W 1989 nt10.17□□□□□ -0.78
TY1B-DR1Q03855 ARE2YNR019W 1929 nt10.16□□□□□ -0.78
TY1B-DR1Q03855 YNL285WYNL285W 372 nt10.16□□□□□ -0.78
TY1B-DR1Q03855 PPM2YOL141W 2088 nt10.16□□□□□ -0.78
TY1B-DR1Q03855 MRPS28YDR337W 861 nt10.15□□□□□ -0.78
TY1B-DR1Q03855 TSR3YOR006C 942 nt10.15□□□□□ -0.78
TY1B-DR1Q03855 YOR041CYOR041C 432 nt10.15□□□□□ -0.78
TY1B-DR1Q03855 YPR127WYPR127W 1038 nt10.15□□□□□ -0.78
TY1B-DR1Q03855 FCY2YER056C 1602 nt10.14□□□□□ -0.79
TY1B-DR1Q03855 MAE1YKL029C 2010 nt10.14□□□□□ -0.79
TY1B-DR1Q03855 GON7YJL184W 372 nt10.14□□□□□ -0.79
TY1B-DR1Q03855 AAT2YLR027C 1257 nt10.14□□□□□ -0.79
TY1B-DR1Q03855 POX1YGL205W 2247 nt10.13□□□□□ -0.79
TY1B-DR1Q03855 YEL034C-AYEL034C-A 603 nt10.13□□□□□ -0.79
TY1B-DR1Q03855 ECM14YHR132C 1293 nt10.13□□□□□ -0.79
TY1B-DR1Q03855 OGG1YML060W 1131 nt10.13□□□□□ -0.79
Retrieved 100 of 7,029 protein–RNA pairs in 94 ms