Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.34■□□□□ 0.692e-8■■■■■ 28.7
NCBP2P52298 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.62e-8■■■■■ 28.7
NCBP2P52298 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.452e-8■■■■■ 28.7
NCBP2P52298 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.44■□□□□ 0.382e-8■■■■■ 28.7
NCBP2P52298 MTMR14-207ENST00000430020 1451 ntTSL 216.92■□□□□ 0.32e-8■■■■■ 28.7
NCBP2P52298 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.222e-8■■■■■ 28.7
NCBP2P52298 INTS8-220ENST00000524333 3272 ntTSL 216.3■□□□□ 0.22e-8■■■■■ 28.7
NCBP2P52298 ATG4B-221ENST00000483778 1103 ntTSL 316.29■□□□□ 0.22e-8■■■■■ 28.7
NCBP2P52298 INTS8-215ENST00000523321 2916 ntTSL 215.85■□□□□ 0.132e-8■■■■■ 28.7
NCBP2P52298 ATG4B-225ENST00000494465 2365 ntTSL 515.63■□□□□ 0.092e-8■■■■■ 28.7
NCBP2P52298 PRDM10-206ENST00000527581 620 ntTSL 315.51■□□□□ 0.072e-8■■■■■ 28.7
NCBP2P52298 ATG4B-216ENST00000475195 762 ntTSL 215.15■□□□□ 0.022e-8■■■■■ 28.7
NCBP2P52298 INTS8-214ENST00000523206 3351 ntTSL 1 (best)14.99□□□□□ -0.012e-8■■■■■ 28.7
NCBP2P52298 INTS8-201ENST00000343161 3434 ntTSL 1 (best)14.95□□□□□ -0.022e-8■■■■■ 28.7
NCBP2P52298 ATG4B-203ENST00000400772 625 ntTSL 414.49□□□□□ -0.092e-8■■■■■ 28.7
NCBP2P52298 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.12e-8■■■■■ 28.7
NCBP2P52298 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.17□□□□□ -0.142e-8■■■■■ 28.7
NCBP2P52298 ATG4B-202ENST00000400771 663 ntTSL 514.14□□□□□ -0.152e-8■■■■■ 28.7
NCBP2P52298 ATG4B-220ENST00000482507 2414 ntTSL 1 (best)13.98□□□□□ -0.172e-8■■■■■ 28.7
NCBP2P52298 ATG4B-215ENST00000468018 721 ntTSL 513.9□□□□□ -0.182e-8■■■■■ 28.7
NCBP2P52298 ATG4B-209ENST00000425239 807 ntTSL 213.42□□□□□ -0.262e-8■■■■■ 28.7
NCBP2P52298 NSD2-218ENST00000508355 2092 ntTSL 1 (best)13.33□□□□□ -0.272e-8■■■■■ 28.7
NCBP2P52298 ATG4B-223ENST00000493618 899 ntTSL 513.32□□□□□ -0.282e-8■■■■■ 28.7
NCBP2P52298 ATG4B-218ENST00000479554 556 ntTSL 413.03□□□□□ -0.322e-8■■■■■ 28.7
NCBP2P52298 MTMR14-212ENST00000480578 387 ntTSL 213.01□□□□□ -0.332e-8■■■■■ 28.7
NCBP2P52298 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.362e-8■■■■■ 28.7
NCBP2P52298 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.82□□□□□ -0.362e-8■■■■■ 28.7
NCBP2P52298 ATG4B-214ENST00000465399 581 ntTSL 212.8□□□□□ -0.362e-8■■■■■ 28.7
NCBP2P52298 ATG4B-222ENST00000491867 435 ntTSL 512.13□□□□□ -0.472e-8■■■■■ 28.7
NCBP2P52298 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.472e-8■■■■■ 28.7
NCBP2P52298 ATG4B-208ENST00000419606 553 ntTSL 412□□□□□ -0.492e-8■■■■■ 28.7
NCBP2P52298 INTS8-218ENST00000523808 597 ntTSL 411.94□□□□□ -0.52e-8■■■■■ 28.7
NCBP2P52298 NSD2-216ENST00000507820 528 ntTSL 511.72□□□□□ -0.532e-8■■■■■ 28.7
NCBP2P52298 ATG4B-207ENST00000415107 356 ntTSL 511.07□□□□□ -0.642e-8■■■■■ 28.7
NCBP2P52298 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC9.87□□□□□ -0.832e-8■■■■■ 28.7
NCBP2P52298 ATG4B-212ENST00000430617 623 ntTSL 39.19□□□□□ -0.942e-8■■■■■ 28.7
NCBP2P52298 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.072e-8■■■■■ 28.7
NCBP2P52298 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.65□□□□□ -1.182e-8■■■■■ 28.7
NCBP2P52298 PRDM10-208ENST00000531431 528 ntTSL 44.71□□□□□ -1.662e-8■■■■■ 28.7
NCBP2P52298 INTS8-212ENST00000522171 735 ntTSL 54.42□□□□□ -1.72e-8■■■■■ 28.7
NCBP2P52298 INTS8-211ENST00000521860 548 ntTSL 53.54□□□□□ -1.842e-8■■■■■ 28.7
NCBP2P52298 SUGP1-211ENST00000590439 764 ntTSL 516.81■□□□□ 0.281e-7■■■■■ 28.5
NCBP2P52298 SUGP1-202ENST00000535070 1094 ntTSL 215.48■□□□□ 0.071e-7■■■■■ 28.5
NCBP2P52298 SUGP1-209ENST00000588731 2282 ntTSL 1 (best)14.88□□□□□ -0.031e-7■■■■■ 28.5
NCBP2P52298 SUGP1-206ENST00000587119 2177 ntTSL 214.85□□□□□ -0.031e-7■■■■■ 28.5
NCBP2P52298 SUGP1-208ENST00000588580 715 ntTSL 214.7□□□□□ -0.061e-7■■■■■ 28.5
NCBP2P52298 SUGP1-215ENST00000606725 728 ntTSL 314.7□□□□□ -0.061e-7■■■■■ 28.5
NCBP2P52298 SUGP1-207ENST00000587716 559 ntTSL 414.59□□□□□ -0.071e-7■■■■■ 28.5
NCBP2P52298 SUGP1-204ENST00000585763 826 ntTSL 514.54□□□□□ -0.081e-7■■■■■ 28.5
NCBP2P52298 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.571e-7■■■■■ 28.5
NCBP2P52298 SUGP1-203ENST00000585444 532 ntTSL 410.54□□□□□ -0.721e-7■■■■■ 28.5
NCBP2P52298 SUGP1-213ENST00000591350 601 ntTSL 49.34□□□□□ -0.911e-7■■■■■ 28.5
NCBP2P52298 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.97■□□□□ 0.471e-6■■■■■ 28.5
NCBP2P52298 AHCTF1-205ENST00000478568 611 ntTSL 415.39■□□□□ 0.051e-6■■■■■ 28.4
NCBP2P52298 MORF4L2-204ENST00000422355 562 ntTSL 29.07□□□□□ -0.964e-9■■■■■ 28.4
NCBP2P52298 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.094e-9■■■■■ 28.4
NCBP2P52298 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.174e-9■■■■■ 28.4
NCBP2P52298 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.234e-9■■■■■ 28.4
NCBP2P52298 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.244e-9■■■■■ 28.4
NCBP2P52298 MORF4L2-209ENST00000442614 869 ntTSL 27.11□□□□□ -1.274e-9■■■■■ 28.4
NCBP2P52298 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.294e-9■■■■■ 28.4
NCBP2P52298 MORF4L2-215ENST00000498064 451 ntTSL 26.27□□□□□ -1.414e-9■■■■■ 28.4
NCBP2P52298 MORF4L2-207ENST00000434230 899 ntTSL 25.44□□□□□ -1.544e-9■■■■■ 28.4
NCBP2P52298 MORF4L2-214ENST00000492116 582 ntTSL 25.14□□□□□ -1.594e-9■■■■■ 28.4
NCBP2P52298 MORF4L2-202ENST00000418819 849 ntTSL 34.69□□□□□ -1.664e-9■■■■■ 28.4
NCBP2P52298 MORF4L2-211ENST00000467755 370 ntTSL 1 (best)4.02□□□□□ -1.774e-9■■■■■ 28.4
NCBP2P52298 MORF4L2-213ENST00000488331 326 ntTSL 22.7□□□□□ -1.984e-9■■■■■ 28.4
NCBP2P52298 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.14□□□□□ -0.154e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-204ENST00000517636 536 ntTSL 413.04□□□□□ -0.324e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.44□□□□□ -0.424e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC11.84□□□□□ -0.514e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC11.66□□□□□ -0.544e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-213ENST00000522166 3157 ntTSL 211.36□□□□□ -0.594e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-207ENST00000518801 1670 ntTSL 1 (best) BASIC7.15□□□□□ -1.274e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.34e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC6.94□□□□□ -1.34e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-214ENST00000522366 1030 ntTSL 46.94□□□□□ -1.34e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.02□□□□□ -1.454e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.94□□□□□ -1.464e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-206ENST00000518169 442 ntTSL 44.03□□□□□ -1.764e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-216ENST00000523532 567 ntTSL 42.83□□□□□ -1.964e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-217ENST00000523667 559 ntTSL 42.61□□□□□ -1.994e-11■■■■■ 28.4
NCBP2P52298 CHCHD7-212ENST00000521982 552 ntTSL 42.07□□□□□ -2.084e-11■■■■■ 28.4
NCBP2P52298 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.03■□□□□ -07e-8■■■■■ 28.3
NCBP2P52298 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC12.49□□□□□ -0.417e-8■■■■■ 28.3
NCBP2P52298 SCRN1-209ENST00000494620 553 ntTSL 410.11□□□□□ -0.797e-8■■■■■ 28.3
NCBP2P52298 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.97e-8■■■■■ 28.3
NCBP2P52298 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.917e-8■■■■■ 28.3
NCBP2P52298 SCRN1-204ENST00000421434 1001 ntTSL 38.42□□□□□ -1.067e-8■■■■■ 28.3
NCBP2P52298 PPP1CB-209ENST00000464273 577 ntTSL 213.34□□□□□ -0.272e-26■■■■■ 28.1
NCBP2P52298 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.418e-19■■■■■ 28.1
NCBP2P52298 SETD3-203ENST00000357563 2191 ntTSL 519.95■□□□□ 0.786e-8■■■■■ 28
NCBP2P52298 SETD3-206ENST00000453764 973 ntTSL 517.64■□□□□ 0.416e-8■■■■■ 28
NCBP2P52298 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.25■□□□□ 0.196e-8■■■■■ 28
NCBP2P52298 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.196e-8■■■■■ 28
NCBP2P52298 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.96■□□□□ 0.156e-8■■■■■ 28
NCBP2P52298 RPL11-204ENST00000467075 377 ntTSL 312.26□□□□□ -0.456e-8■■■■■ 28
NCBP2P52298 SETD3-205ENST00000446066 1754 ntTSL 511.33□□□□□ -0.596e-8■■■■■ 28
NCBP2P52298 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC10.85□□□□□ -0.676e-8■■■■■ 28
NCBP2P52298 RPL11-201ENST00000374550 634 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.016e-8■■■■■ 28
Retrieved 100 of 18,329 protein–RNA pairs in 643.1 ms