Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 HBN1YCL026C-B 582 nt8.64□□□□□ -1.03
VPS27P40343 PAC2YER007W 1557 nt8.64□□□□□ -1.03
VPS27P40343 NTG1YAL015C 1200 nt8.63□□□□□ -1.03
VPS27P40343 VBA5YKR105C 1749 nt8.63□□□□□ -1.03
VPS27P40343 SMX3YPR182W 261 nt8.62□□□□□ -1.03
VPS27P40343 YJL163CYJL163C 1668 nt8.62□□□□□ -1.03
VPS27P40343 CCT3YJL014W 1605 nt8.62□□□□□ -1.03
VPS27P40343 KIN1YDR122W 3195 nt8.61□□□□□ -1.03
VPS27P40343 MRPS28YDR337W 861 nt8.61□□□□□ -1.03
VPS27P40343 COS10YNR075W 1125 nt8.61□□□□□ -1.03
VPS27P40343 TAH11YJR046W 1815 nt8.61□□□□□ -1.03
VPS27P40343 SEC23YPR181C 2307 nt8.6□□□□□ -1.03
VPS27P40343 ICP55YER078C 1536 nt8.6□□□□□ -1.03
VPS27P40343 PPS1YBR276C 2424 nt8.6□□□□□ -1.03
VPS27P40343 TRS31YDR472W 852 nt8.6□□□□□ -1.03
VPS27P40343 RPL2BYIL018W 765 nt8.6□□□□□ -1.03
VPS27P40343 MCP1YOR228C 909 nt8.6□□□□□ -1.03
VPS27P40343 LGE1YPL055C 999 nt8.6□□□□□ -1.03
VPS27P40343 RGD2YFL047W 2145 nt8.6□□□□□ -1.03
VPS27P40343 EFM1YHL039W 1758 nt8.59□□□□□ -1.03
VPS27P40343 PRI1YIR008C 1230 nt8.59□□□□□ -1.03
VPS27P40343 YLL056CYLL056C 897 nt8.59□□□□□ -1.03
VPS27P40343 YOL046CYOL046C 675 nt8.59□□□□□ -1.03
VPS27P40343 ERG10YPL028W 1197 nt8.59□□□□□ -1.03
VPS27P40343 YPR076WYPR076W 375 nt8.59□□□□□ -1.03
VPS27P40343 AFG2YLR397C 2343 nt8.59□□□□□ -1.03
VPS27P40343 MSC3YLR219W 2187 nt8.58□□□□□ -1.04
VPS27P40343 GSH1YJL101C 2037 nt8.58□□□□□ -1.04
VPS27P40343 YKR023WYKR023W 1593 nt8.58□□□□□ -1.04
VPS27P40343 FIT2YOR382W 462 nt8.58□□□□□ -1.04
VPS27P40343 SPE3YPR069C 882 nt8.58□□□□□ -1.04
VPS27P40343 ECM10YEL030W 1935 nt8.57□□□□□ -1.04
VPS27P40343 YDL177CYDL177C 513 nt8.57□□□□□ -1.04
VPS27P40343 MRPL19YNL185C 477 nt8.57□□□□□ -1.04
VPS27P40343 SEC62YPL094C 825 nt8.57□□□□□ -1.04
VPS27P40343 YFL013W-AYFL013W-A 804 nt8.56□□□□□ -1.04
VPS27P40343 AGX1YFL030W 1158 nt8.56□□□□□ -1.04
VPS27P40343 GPH1YPR160W 2709 nt8.56□□□□□ -1.04
VPS27P40343 HOG1YLR113W 1308 nt8.55□□□□□ -1.04
VPS27P40343 YMR034CYMR034C 1305 nt8.55□□□□□ -1.04
VPS27P40343 HED1YDR014W-A 489 nt8.55□□□□□ -1.04
VPS27P40343 COX16YJL003W 357 nt8.55□□□□□ -1.04
VPS27P40343 YNL040WYNL040W 1371 nt8.55□□□□□ -1.04
VPS27P40343 NDE1YMR145C 1683 nt8.55□□□□□ -1.04
VPS27P40343 NUP49YGL172W 1419 nt8.54□□□□□ -1.04
VPS27P40343 URA1YKL216W 945 nt8.54□□□□□ -1.04
VPS27P40343 YNR014WYNR014W 639 nt8.54□□□□□ -1.04
VPS27P40343 YIL108WYIL108W 2091 nt8.51□□□□□ -1.05
VPS27P40343 YSC83YHR017W 1158 nt8.51□□□□□ -1.05
VPS27P40343 LDB7YBL006C 543 nt8.51□□□□□ -1.05
VPS27P40343 IRC11YOR013W 471 nt8.51□□□□□ -1.05
VPS27P40343 BIO3YNR058W 1443 nt8.51□□□□□ -1.05
VPS27P40343 SLA2YNL243W 2907 nt8.51□□□□□ -1.05
VPS27P40343 RQC1YDR333C 2172 nt8.51□□□□□ -1.05
VPS27P40343 ADE5,7YGL234W 2409 nt8.5□□□□□ -1.05
VPS27P40343 YLL066CYLL066C 3618 nt8.5□□□□□ -1.05
VPS27P40343 PPH21YDL134C 1110 nt8.5□□□□□ -1.05
VPS27P40343 YHR020WYHR020W 2067 nt8.5□□□□□ -1.05
VPS27P40343 BIM1YER016W 1035 nt8.49□□□□□ -1.05
VPS27P40343 PPM2YOL141W 2088 nt8.49□□□□□ -1.05
VPS27P40343 DOT1YDR440W 1749 nt8.49□□□□□ -1.05
VPS27P40343 PEX31YGR004W 1389 nt8.48□□□□□ -1.05
VPS27P40343 MPH3YJR160C 1809 nt8.48□□□□□ -1.05
VPS27P40343 PPH22YDL188C 1134 nt8.48□□□□□ -1.05
VPS27P40343 DYS1YHR068W 1164 nt8.48□□□□□ -1.05
VPS27P40343 RPL5YPL131W 894 nt8.48□□□□□ -1.05
VPS27P40343 HDA1YNL021W 2121 nt8.48□□□□□ -1.05
VPS27P40343 YKL018C-AYKL018C-A 300 nt8.47□□□□□ -1.05
VPS27P40343 YNL092WYNL092W 1203 nt8.47□□□□□ -1.05
VPS27P40343 TMA46YOR091W 1038 nt8.47□□□□□ -1.05
VPS27P40343 SGV1YPR161C 1974 nt8.47□□□□□ -1.05
VPS27P40343 ATG36YJL185C 882 nt8.46□□□□□ -1.06
VPS27P40343 ASR1YPR093C 867 nt8.46□□□□□ -1.06
VPS27P40343 FCY22YER060W-A 1593 nt8.46□□□□□ -1.06
VPS27P40343 DAL7YIR031C 1665 nt8.46□□□□□ -1.06
VPS27P40343 tG(GCC)BtG(GCC)B 71 nt8.45□□□□□ -1.06
VPS27P40343 SUF16tG(GCC)C 71 nt8.45□□□□□ -1.06
VPS27P40343 tG(GCC)D1tG(GCC)D1 71 nt8.45□□□□□ -1.06
VPS27P40343 tG(GCC)D2tG(GCC)D2 71 nt8.45□□□□□ -1.06
VPS27P40343 tG(GCC)EtG(GCC)E 71 nt8.45□□□□□ -1.06
VPS27P40343 SUF20tG(GCC)F1 71 nt8.45□□□□□ -1.06
VPS27P40343 tG(GCC)F2tG(GCC)F2 71 nt8.45□□□□□ -1.06
VPS27P40343 tG(GCC)G1tG(GCC)G1 71 nt8.45□□□□□ -1.06
VPS27P40343 tG(GCC)G2tG(GCC)G2 71 nt8.45□□□□□ -1.06
VPS27P40343 tG(GCC)J1tG(GCC)J1 71 nt8.45□□□□□ -1.06
VPS27P40343 SUF23tG(GCC)J2 71 nt8.45□□□□□ -1.06
VPS27P40343 tG(GCC)MtG(GCC)M 71 nt8.45□□□□□ -1.06
VPS27P40343 tG(GCC)O1tG(GCC)O1 71 nt8.45□□□□□ -1.06
VPS27P40343 SUF17tG(GCC)O2 71 nt8.45□□□□□ -1.06
VPS27P40343 tG(GCC)P1tG(GCC)P1 71 nt8.45□□□□□ -1.06
VPS27P40343 tG(GCC)P2tG(GCC)P2 71 nt8.45□□□□□ -1.06
VPS27P40343 AAD14YNL331C 1131 nt8.45□□□□□ -1.06
VPS27P40343 OPI11YPR044C 354 nt8.45□□□□□ -1.06
VPS27P40343 PLB3YOL011W 2061 nt8.44□□□□□ -1.06
VPS27P40343 GCN3YKR026C 918 nt8.44□□□□□ -1.06
VPS27P40343 SWD1YAR003W 1281 nt8.44□□□□□ -1.06
VPS27P40343 STT3YGL022W 2157 nt8.44□□□□□ -1.06
VPS27P40343 HOC1YJR075W 1191 nt8.43□□□□□ -1.06
VPS27P40343 TOS6YNL300W 309 nt8.43□□□□□ -1.06
VPS27P40343 YOR300WYOR300W 309 nt8.43□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 78.8 ms