Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 CTA1YDR256C 1548 nt6.81□□□□□ -1.32
TDA11P38854 PAC2YER007W 1557 nt6.81□□□□□ -1.32
TDA11P38854 PEX31YGR004W 1389 nt6.81□□□□□ -1.32
TDA11P38854 MLS1YNL117W 1665 nt6.81□□□□□ -1.32
TDA11P38854 VBA5YKR105C 1749 nt6.8□□□□□ -1.32
TDA11P38854 PRP2YNR011C 2631 nt6.8□□□□□ -1.32
TDA11P38854 COS10YNR075W 1125 nt6.8□□□□□ -1.32
TDA11P38854 CIR2YOR356W 1896 nt6.8□□□□□ -1.32
TDA11P38854 SKI2YLR398C 3864 nt6.8□□□□□ -1.32
TDA11P38854 YBR284WYBR284W 2394 nt6.8□□□□□ -1.32
TDA11P38854 TUF1YOR187W 1314 nt6.79□□□□□ -1.32
TDA11P38854 DOC1YGL240W 753 nt6.79□□□□□ -1.32
TDA11P38854 YML079WYML079W 606 nt6.79□□□□□ -1.32
TDA11P38854 RPL43AYPR043W 279 nt6.79□□□□□ -1.32
TDA11P38854 RIO1YOR119C 1455 nt6.78□□□□□ -1.32
TDA11P38854 ADE17YMR120C 1779 nt6.77□□□□□ -1.33
TDA11P38854 LAT1YNL071W 1449 nt6.77□□□□□ -1.33
TDA11P38854 MIP1YOR330C 3765 nt6.77□□□□□ -1.33
TDA11P38854 YJL144WYJL144W 315 nt6.77□□□□□ -1.33
TDA11P38854 ATP23YNR020C 813 nt6.77□□□□□ -1.33
TDA11P38854 DSC3YOR223W 879 nt6.77□□□□□ -1.33
TDA11P38854 PSA1YDL055C 1086 nt6.76□□□□□ -1.33
TDA11P38854 AIM33YML087C 939 nt6.76□□□□□ -1.33
TDA11P38854 CYC8YBR112C 2901 nt6.75□□□□□ -1.33
TDA11P38854 GEF1YJR040W 2340 nt6.75□□□□□ -1.33
TDA11P38854 HPT1YDR399W 666 nt6.75□□□□□ -1.33
TDA11P38854 NCA3YJL116C 1014 nt6.75□□□□□ -1.33
TDA11P38854 SMC5YOL034W 3282 nt6.74□□□□□ -1.33
TDA11P38854 NAF1YNL124W 1479 nt6.74□□□□□ -1.33
TDA11P38854 BIM1YER016W 1035 nt6.73□□□□□ -1.33
TDA11P38854 CUE4YML101C 354 nt6.73□□□□□ -1.33
TDA11P38854 YIL055CYIL055C 1884 nt6.73□□□□□ -1.33
TDA11P38854 GCN3YKR026C 918 nt6.72□□□□□ -1.33
TDA11P38854 ERV2YPR037C 591 nt6.72□□□□□ -1.33
TDA11P38854 ADH5YBR145W 1056 nt6.72□□□□□ -1.33
TDA11P38854 SKP1YDR328C 585 nt6.71□□□□□ -1.34
TDA11P38854 HIS1YER055C 894 nt6.71□□□□□ -1.34
TDA11P38854 YJR107WYJR107W 987 nt6.71□□□□□ -1.34
TDA11P38854 CCW12YLR110C 402 nt6.71□□□□□ -1.34
TDA11P38854 PEX13YLR191W 1161 nt6.71□□□□□ -1.34
TDA11P38854 MSI1YBR195C 1269 nt6.71□□□□□ -1.34
TDA11P38854 SES1YDR023W 1389 nt6.7□□□□□ -1.34
TDA11P38854 TRS31YDR472W 852 nt6.7□□□□□ -1.34
TDA11P38854 DMC1YER179W 1005 nt6.7□□□□□ -1.34
TDA11P38854 YFL013W-AYFL013W-A 804 nt6.7□□□□□ -1.34
TDA11P38854 NMA2YGR010W 1188 nt6.7□□□□□ -1.34
TDA11P38854 YAL019W-AYAL019W-A 570 nt6.7□□□□□ -1.34
TDA11P38854 URA1YKL216W 945 nt6.7□□□□□ -1.34
TDA11P38854 COX5AYNL052W 462 nt6.7□□□□□ -1.34
TDA11P38854 PET117YER058W 324 nt6.69□□□□□ -1.34
TDA11P38854 CIS3YJL158C 684 nt6.69□□□□□ -1.34
TDA11P38854 YJR142WYJR142W 1029 nt6.69□□□□□ -1.34
TDA11P38854 PTH2YBL057C 627 nt6.69□□□□□ -1.34
TDA11P38854 EFT2YDR385W 2529 nt6.69□□□□□ -1.34
TDA11P38854 EFT1YOR133W 2529 nt6.69□□□□□ -1.34
TDA11P38854 CSC1YLR241W 2349 nt6.68□□□□□ -1.34
TDA11P38854 UME1YPL139C 1383 nt6.68□□□□□ -1.34
TDA11P38854 IMA5YJL216C 1746 nt6.67□□□□□ -1.34
TDA11P38854 ACS1YAL054C 2142 nt6.67□□□□□ -1.34
TDA11P38854 YCR049CYCR049C 447 nt6.67□□□□□ -1.34
TDA11P38854 NAS6YGR232W 687 nt6.67□□□□□ -1.34
TDA11P38854 YKR032WYKR032W 315 nt6.67□□□□□ -1.34
TDA11P38854 YOX1YML027W 1158 nt6.67□□□□□ -1.34
TDA11P38854 RGD1YBR260C 2001 nt6.67□□□□□ -1.34
TDA11P38854 NMD5YJR132W 3147 nt6.66□□□□□ -1.34
TDA11P38854 SUF5tG(CCC)O 72 nt6.66□□□□□ -1.34
TDA11P38854 STS1YIR011C 960 nt6.66□□□□□ -1.34
TDA11P38854 YJL213WYJL213W 996 nt6.66□□□□□ -1.34
TDA11P38854 YPQ1YOL092W 927 nt6.66□□□□□ -1.34
TDA11P38854 LAG2YOL025W 1983 nt6.66□□□□□ -1.34
TDA11P38854 TPO3YPR156C 1869 nt6.65□□□□□ -1.34
TDA11P38854 TOS6YNL300W 309 nt6.65□□□□□ -1.34
TDA11P38854 HRB1YNL004W 1365 nt6.65□□□□□ -1.35
TDA11P38854 PPM1YDR435C 987 nt6.64□□□□□ -1.35
TDA11P38854 MGM101YJR144W 810 nt6.64□□□□□ -1.35
TDA11P38854 ICS3YJL077C 396 nt6.63□□□□□ -1.35
TDA11P38854 PMT3YOR321W 2262 nt6.63□□□□□ -1.35
TDA11P38854 YDR415CYDR415C 1125 nt6.62□□□□□ -1.35
TDA11P38854 YPL067CYPL067C 597 nt6.62□□□□□ -1.35
TDA11P38854 OSM1YJR051W 1506 nt6.61□□□□□ -1.35
TDA11P38854 YGL081WYGL081W 963 nt6.61□□□□□ -1.35
TDA11P38854 YML6YML025C 861 nt6.61□□□□□ -1.35
TDA11P38854 MBF1YOR298C-A 456 nt6.61□□□□□ -1.35
TDA11P38854 MCP1YOR228C 909 nt6.6□□□□□ -1.35
TDA11P38854 HEM1YDR232W 1647 nt6.59□□□□□ -1.35
TDA11P38854 snR82snR82 268 nt6.59□□□□□ -1.35
TDA11P38854 URH1YDR400W 1023 nt6.59□□□□□ -1.35
TDA11P38854 DUS4YLR405W 1104 nt6.59□□□□□ -1.35
TDA11P38854 PUS4YNL292W 1212 nt6.59□□□□□ -1.35
TDA11P38854 IRC11YOR013W 471 nt6.59□□□□□ -1.35
TDA11P38854 DPM1YPR183W 804 nt6.59□□□□□ -1.35
TDA11P38854 POP1YNL221C 2628 nt6.59□□□□□ -1.36
TDA11P38854 CYS3YAL012W 1185 nt6.58□□□□□ -1.36
TDA11P38854 CST26YBR042C 1194 nt6.58□□□□□ -1.36
TDA11P38854 CIT2YCR005C 1383 nt6.57□□□□□ -1.36
TDA11P38854 KTR5YNL029C 1569 nt6.57□□□□□ -1.36
TDA11P38854 PIL1YGR086C 1020 nt6.57□□□□□ -1.36
TDA11P38854 AAD14YNL331C 1131 nt6.57□□□□□ -1.36
TDA11P38854 YOR111WYOR111W 699 nt6.57□□□□□ -1.36
TDA11P38854 MET8YBR213W 825 nt6.57□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms